Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC091305.2-201ENST00000624049 1576 ntBASIC7.23□□□□□ -1.25
NID1P14543 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.23□□□□□ -1.25
NID1P14543 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
NID1P14543 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
NID1P14543 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NID1P14543 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.23□□□□□ -1.25
NID1P14543 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NID1P14543 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC7.23□□□□□ -1.25
NID1P14543 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NID1P14543 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
NID1P14543 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.22□□□□□ -1.25
NID1P14543 ZNF300P1-201ENST00000356555 1822 ntBASIC7.22□□□□□ -1.25
NID1P14543 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.22□□□□□ -1.25
NID1P14543 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.22□□□□□ -1.25
NID1P14543 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.22□□□□□ -1.25
NID1P14543 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
NID1P14543 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
NID1P14543 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NID1P14543 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.22□□□□□ -1.25
NID1P14543 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.22□□□□□ -1.25
NID1P14543 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NID1P14543 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NID1P14543 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NID1P14543 Y_RNA.263-201ENST00000364659 114 ntBASIC7.22□□□□□ -1.25
NID1P14543 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
NID1P14543 RNA5SP185-201ENST00000390963 114 ntBASIC7.22□□□□□ -1.25
NID1P14543 Y_RNA.582-201ENST00000391023 95 ntBASIC7.22□□□□□ -1.25
NID1P14543 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
NID1P14543 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC7.22□□□□□ -1.25
NID1P14543 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC7.22□□□□□ -1.25
NID1P14543 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC7.22□□□□□ -1.25
NID1P14543 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC7.22□□□□□ -1.25
NID1P14543 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC7.22□□□□□ -1.25
NID1P14543 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.22□□□□□ -1.25
NID1P14543 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.22□□□□□ -1.25
NID1P14543 VN1R10P-201ENST00000447106 875 ntBASIC7.22□□□□□ -1.25
NID1P14543 AL050341.1-201ENST00000447743 313 ntBASIC7.22□□□□□ -1.25
NID1P14543 NIPA2P5-201ENST00000452282 464 ntBASIC7.22□□□□□ -1.25
NID1P14543 AC063955.1-201ENST00000462872 685 ntBASIC7.22□□□□□ -1.25
NID1P14543 RN7SL508P-201ENST00000464472 303 ntBASIC7.22□□□□□ -1.25
NID1P14543 NDUFS5P2-201ENST00000484004 306 ntBASIC7.22□□□□□ -1.25
NID1P14543 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC7.22□□□□□ -1.25
NID1P14543 AC025459.1-201ENST00000504072 156 ntBASIC7.22□□□□□ -1.25
NID1P14543 AC022483.1-201ENST00000514020 567 ntBASIC7.22□□□□□ -1.25
NID1P14543 SETP21-201ENST00000514799 892 ntBASIC7.22□□□□□ -1.25
NID1P14543 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.22□□□□□ -1.25
NID1P14543 AC023632.1-201ENST00000518463 375 ntBASIC7.22□□□□□ -1.25
NID1P14543 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC7.22□□□□□ -1.25
NID1P14543 GZMB-205ENST00000526004 819 ntTSL 3 BASIC7.22□□□□□ -1.25
NID1P14543 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC7.22□□□□□ -1.25
NID1P14543 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 AC005230.1-201ENST00000555418 285 ntBASIC7.22□□□□□ -1.25
NID1P14543 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC7.22□□□□□ -1.25
NID1P14543 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC7.22□□□□□ -1.25
NID1P14543 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.22□□□□□ -1.25
NID1P14543 AC136944.5-201ENST00000573021 151 ntBASIC7.22□□□□□ -1.25
NID1P14543 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.22□□□□□ -1.25
NID1P14543 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC7.22□□□□□ -1.25
NID1P14543 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC7.22□□□□□ -1.25
NID1P14543 AP001267.4-201ENST00000602598 545 ntBASIC7.22□□□□□ -1.25
NID1P14543 AC069499.2-201ENST00000610665 382 ntBASIC7.22□□□□□ -1.25
NID1P14543 AL109933.4-201ENST00000612111 157 ntBASIC7.22□□□□□ -1.25
NID1P14543 AC138904.2-201ENST00000614412 107 ntBASIC7.22□□□□□ -1.25
NID1P14543 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.22□□□□□ -1.25
NID1P14543 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.22□□□□□ -1.25
NID1P14543 FAM157B-203ENST00000639350 358 ntBASIC7.22□□□□□ -1.25
NID1P14543 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.22□□□□□ -1.25
NID1P14543 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.22□□□□□ -1.25
NID1P14543 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NID1P14543 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
NID1P14543 AC130456.1-201ENST00000565085 1363 ntBASIC7.21□□□□□ -1.25
NID1P14543 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC7.21□□□□□ -1.25
NID1P14543 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NID1P14543 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.21□□□□□ -1.25
NID1P14543 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
NID1P14543 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.21□□□□□ -1.25
NID1P14543 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
NID1P14543 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.21□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 247.2 ms