Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 AC016583.1-201ENST00000624221 2431 ntBASIC3.6□□□□□ -1.83
APOBP04114 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 AL022237.1-201ENST00000446663 358 ntBASIC3.6□□□□□ -1.83
APOBP04114 AC114728.1-201ENST00000488289 483 ntBASIC3.6□□□□□ -1.83
APOBP04114 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBP04114 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC3.6□□□□□ -1.83
APOBP04114 AC092375.1-201ENST00000550410 637 ntBASIC3.6□□□□□ -1.83
APOBP04114 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
APOBP04114 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 SPATA31B1P-201ENST00000434692 4016 ntBASIC3.6□□□□□ -1.83
APOBP04114 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
APOBP04114 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 AC096921.2-201ENST00000561507 1916 ntBASIC3.6□□□□□ -1.83
APOBP04114 CASC15-203ENST00000605917 4461 ntBASIC3.6□□□□□ -1.83
APOBP04114 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 RNA5SP478-201ENST00000364657 115 ntBASIC3.6□□□□□ -1.83
APOBP04114 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC3.6□□□□□ -1.83
APOBP04114 NPM1P27-201ENST00000502784 830 ntBASIC3.6□□□□□ -1.83
APOBP04114 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.6□□□□□ -1.83
APOBP04114 AL590392.1-201ENST00000604960 446 ntBASIC3.6□□□□□ -1.83
APOBP04114 AP000346.3-201ENST00000622821 210 ntBASIC3.6□□□□□ -1.83
APOBP04114 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC3.6□□□□□ -1.83
APOBP04114 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBP04114 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBP04114 AP004289.1-201ENST00000436307 2205 ntBASIC3.6□□□□□ -1.83
APOBP04114 MIR640-201ENST00000385086 96 ntBASIC3.6□□□□□ -1.83
APOBP04114 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.6□□□□□ -1.83
APOBP04114 AC068138.1-201ENST00000412635 217 ntBASIC3.6□□□□□ -1.83
APOBP04114 HMGA1P8-201ENST00000414130 321 ntBASIC3.6□□□□□ -1.83
APOBP04114 AL590139.1-201ENST00000416267 400 ntBASIC3.6□□□□□ -1.83
APOBP04114 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBP04114 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.6□□□□□ -1.83
APOBP04114 MGAT2P1-201ENST00000449718 797 ntBASIC3.6□□□□□ -1.83
APOBP04114 AC147055.3-201ENST00000510547 851 ntBASIC3.6□□□□□ -1.83
APOBP04114 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBP04114 AC015818.6-201ENST00000584274 634 ntBASIC3.6□□□□□ -1.83
APOBP04114 AL109618.2-201ENST00000605527 211 ntBASIC3.6□□□□□ -1.83
APOBP04114 AC132068.1-201ENST00000623805 459 ntBASIC3.6□□□□□ -1.83
APOBP04114 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC3.6□□□□□ -1.83
APOBP04114 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBP04114 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
APOBP04114 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBP04114 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBP04114 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBP04114 AC007938.2-201ENST00000604666 2634 ntBASIC3.6□□□□□ -1.83
APOBP04114 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
APOBP04114 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 SNORA51.8-201ENST00000384234 132 ntBASIC3.6□□□□□ -1.83
APOBP04114 UBE2V1P14-201ENST00000415815 558 ntBASIC3.6□□□□□ -1.83
APOBP04114 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC3.6□□□□□ -1.83
APOBP04114 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBP04114 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.6□□□□□ -1.83
APOBP04114 MIR6758-201ENST00000620653 63 ntBASIC3.6□□□□□ -1.83
APOBP04114 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBP04114 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBP04114 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC3.59□□□□□ -1.83
APOBP04114 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
APOBP04114 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 AL356317.1-201ENST00000396110 1436 ntBASIC3.59□□□□□ -1.83
APOBP04114 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBP04114 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
APOBP04114 EPS15P1-202ENST00000459691 2071 ntBASIC3.59□□□□□ -1.83
APOBP04114 AC010132.2-201ENST00000295493 1043 ntBASIC3.59□□□□□ -1.83
APOBP04114 HIST1H3PS1-201ENST00000404612 417 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms