Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AC005726.4-201ENST00000582858 458 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 GLYATL1P2-202ENST00000588046 902 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AC074141.1-201ENST00000588129 2995 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 FO082842.1-201ENST00000423552 1370 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 RPL12P43-201ENST00000420608 499 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 FAR1P1-201ENST00000427163 934 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 IGLV3-4-201ENST00000432300 244 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 FABP5P2-201ENST00000439042 408 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 EIF5AP4-201ENST00000441206 465 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 NDUFA5P5-201ENST00000468361 342 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 RN7SL369P-201ENST00000477138 299 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 RPL12P31-201ENST00000478433 450 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 RN7SL714P-201ENST00000487050 298 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 KHDC1P1-201ENST00000511053 508 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 RN7SKP98-201ENST00000517070 156 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 IGLV3-6-201ENST00000523937 250 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 OR10D4P-201ENST00000525892 951 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 MIR5095-201ENST00000578844 88 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 AC092681.3-201ENST00000609463 678 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 AL136097.3-201ENST00000611097 505 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 AC022400.9-201ENST00000623633 273 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 AL596275.2-208ENST00000641192 594 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 QRSL1P1-201ENST00000400977 1540 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 AL591848.4-201ENST00000567832 3472 ntBASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TBC1D3FA6NER0 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 AL589655.1-201ENST00000405398 482 ntBASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 EEF1B2P8-201ENST00000414101 671 ntBASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TBC1D3FA6NER0 AL713922.1-201ENST00000416477 747 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms