Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
LINC00474Q9P2X8 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.13□□□□□ -1.75
LINC00474Q9P2X8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.13□□□□□ -1.75
LINC00474Q9P2X8 GLYATL1P1-201ENST00000528297 1607 ntBASIC4.13□□□□□ -1.75
LINC00474Q9P2X8 SAGE3P-201ENST00000619800 1635 ntBASIC4.13□□□□□ -1.75
LINC00474Q9P2X8 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00474Q9P2X8 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00474Q9P2X8 EEF1A1P24-201ENST00000451469 1378 ntBASIC4.13□□□□□ -1.75
LINC00474Q9P2X8 AC109446.4-201ENST00000623235 2755 ntBASIC4.13□□□□□ -1.75
LINC00474Q9P2X8 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00474Q9P2X8 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 TNPO1P2-201ENST00000426249 2665 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 SNORD8-201ENST00000363915 110 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 RNU1-84P-201ENST00000365447 164 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 SUMO2P8-201ENST00000434672 286 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 RBMY2HP-201ENST00000457961 720 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 RN7SL552P-201ENST00000462094 276 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 RN7SL643P-201ENST00000471845 291 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AC015524.1-201ENST00000491585 472 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 KHDC1P1-201ENST00000511053 508 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 RNA5SP96-201ENST00000516041 107 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AC009120.3-201ENST00000563335 499 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 SETP3-201ENST00000581726 813 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AC090616.1-201ENST00000583895 447 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AC026898.1-201ENST00000586404 571 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AL049840.6-201ENST00000604583 345 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 SNORD96A-201ENST00000606577 79 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AL138693.1-201ENST00000622219 129 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 RACK1-235ENST00000626067 564 ntTSL 2 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 LINC02495-203ENST00000636704 242 ntBASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00474Q9P2X8 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 AC093849.1-201ENST00000563631 2209 ntBASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 AC007842.1-201ENST00000597336 2039 ntBASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 CASC19-260ENST00000641828 2001 ntBASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 PSMA6P1-201ENST00000400275 741 ntBASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.11□□□□□ -1.75
LINC00474Q9P2X8 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms