Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC008507.3-201ENST00000585753 472 ntBASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 AL953862.2-201ENST00000603089 820 ntBASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 AC073389.3-201ENST00000609434 935 ntBASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 AP001264.1-201ENST00000620602 703 ntBASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 HSPD1P9-201ENST00000420325 1636 ntBASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 SAGE3P-201ENST00000619800 1635 ntBASIC6.36□□□□□ -1.39
TM9SF3Q9HD45 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC027575.3-201ENST00000583058 2747 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 OLMALINC-203ENST00000641087 3779 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AL157831.2-201ENST00000564681 3095 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 OR11H13P-201ENST00000359695 979 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 RN7SKP78-201ENST00000364711 318 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 IPPKP1-201ENST00000422501 768 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC242426.1-201ENST00000435270 960 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 RBMY2AP-201ENST00000445405 1157 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 RBMY2CP-201ENST00000448575 1157 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 RBMY2DP-202ENST00000448881 1157 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 MGAT2P1-201ENST00000449718 797 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 RBMY2BP-202ENST00000451071 1156 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 RPL23AP64-201ENST00000469465 435 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 RPL12P31-201ENST00000478433 450 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC022206.1-201ENST00000495947 347 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 LSM3P4-201ENST00000502948 309 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 IGKV3D-34-201ENST00000522638 302 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC027369.2-201ENST00000528030 440 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 NANOGNBP2-201ENST00000544753 553 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AP005136.2-201ENST00000583253 1049 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC026124.2-201ENST00000621847 656 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 SNX18P12-201ENST00000624821 759 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 OR7E91P-202ENST00000642062 1198 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC116158.1-201ENST00000560231 2129 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC010329.1-201ENST00000593903 8328 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 AC011504.1-201ENST00000623331 4103 ntBASIC6.35□□□□□ -1.39
TM9SF3Q9HD45 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TM9SF3Q9HD45 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TM9SF3Q9HD45 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TM9SF3Q9HD45 AC125238.2-201ENST00000430003 1440 ntBASIC6.34□□□□□ -1.39
TM9SF3Q9HD45 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TM9SF3Q9HD45 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TM9SF3Q9HD45 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.34□□□□□ -1.39
TM9SF3Q9HD45 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TM9SF3Q9HD45 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.34□□□□□ -1.39
TM9SF3Q9HD45 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TM9SF3Q9HD45 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TM9SF3Q9HD45 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.34□□□□□ -1.39
TM9SF3Q9HD45 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms