Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM4Q9C037 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM4Q9C037 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.4□□□□□ -1.39
TRIM4Q9C037 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
TRIM4Q9C037 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.4□□□□□ -1.39
TRIM4Q9C037 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM4Q9C037 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM4Q9C037 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM4Q9C037 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM4Q9C037 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM4Q9C037 AL731532.1-201ENST00000623972 4236 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 AC010401.2-201ENST00000575137 4934 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 Z95114.1-201ENST00000624264 14574 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM4Q9C037 SNORD8-201ENST00000363915 110 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM4Q9C037 FDPSP5-201ENST00000399474 1057 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 SNORA77.2-201ENST00000408571 112 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 RN7SKP129-201ENST00000410288 299 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 ARMC4P1-201ENST00000438905 707 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 RPL7AP71-201ENST00000451120 739 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 AC117395.1-201ENST00000487390 403 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 AC106872.4-201ENST00000510050 523 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM4Q9C037 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 DPPA3P2-202ENST00000557188 1219 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 AC023389.2-201ENST00000580031 955 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 MIR4433B-201ENST00000581329 102 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM4Q9C037 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 AC063977.7-201ENST00000594454 337 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 AP000577.1-201ENST00000624366 878 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 AC073857.1-201ENST00000625082 1054 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM4Q9C037 AC005261.6-201ENST00000623072 1387 ntBASIC6.39□□□□□ -1.39
TRIM4Q9C037 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM4Q9C037 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
TRIM4Q9C037 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM4Q9C037 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM4Q9C037 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM4Q9C037 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM4Q9C037 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM4Q9C037 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM4Q9C037 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM4Q9C037 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 RN7SKP69-201ENST00000365390 305 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM4Q9C037 PPIAP26-201ENST00000377951 522 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 RBBP4P5-201ENST00000398583 1266 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM4Q9C037 REREP1Y-201ENST00000422655 198 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 BRWD1P3-201ENST00000428816 390 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 REREP2Y-201ENST00000439103 200 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC021146.11-201ENST00000503319 491 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 SNORA58-201ENST00000505219 137 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 IGLC4-201ENST00000517690 248 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 TDGP1-201ENST00000543961 1229 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC018690.1-201ENST00000608144 626 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC093388.1-201ENST00000609166 430 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM4Q9C037 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC109309.2-201ENST00000612597 332 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 uc_338.31-201ENST00000615595 186 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM4Q9C037 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.38□□□□□ -1.39
TRIM4Q9C037 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms