Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 MYL6P5-201ENST00000412707 459 ntBASIC9.39□□□□□ -0.91
VPS8Q8N3P4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC9.39□□□□□ -0.91
VPS8Q8N3P4 TPM3P3-201ENST00000521343 354 ntBASIC9.39□□□□□ -0.91
VPS8Q8N3P4 LRRC37A16P-202ENST00000586022 3725 ntBASIC9.38□□□□□ -0.91
VPS8Q8N3P4 AC114876.1-201ENST00000490962 1366 ntBASIC9.38□□□□□ -0.91
VPS8Q8N3P4 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 SNRPEP6-201ENST00000407465 277 ntBASIC9.38□□□□□ -0.91
VPS8Q8N3P4 RPS4XP5-201ENST00000419038 768 ntBASIC9.38□□□□□ -0.91
VPS8Q8N3P4 AC127526.2-201ENST00000426436 775 ntBASIC9.38□□□□□ -0.91
VPS8Q8N3P4 MTND6P12-201ENST00000428247 522 ntBASIC9.38□□□□□ -0.91
VPS8Q8N3P4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 RPL23AP40-201ENST00000487630 390 ntBASIC9.38□□□□□ -0.91
VPS8Q8N3P4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 IGKV3D-34-201ENST00000522638 302 ntBASIC9.38□□□□□ -0.91
VPS8Q8N3P4 AC091078.2-201ENST00000557145 559 ntBASIC9.38□□□□□ -0.91
VPS8Q8N3P4 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC9.38□□□□□ -0.91
VPS8Q8N3P4 AC087269.2-201ENST00000641764 975 ntBASIC9.38□□□□□ -0.91
VPS8Q8N3P4 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS8Q8N3P4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 AL355377.1-201ENST00000621125 1653 ntBASIC9.37□□□□□ -0.91
VPS8Q8N3P4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 RNA5SP284-201ENST00000384547 118 ntBASIC9.37□□□□□ -0.91
VPS8Q8N3P4 RPL23AP19-201ENST00000436229 369 ntBASIC9.37□□□□□ -0.91
VPS8Q8N3P4 AL663074.2-201ENST00000440621 479 ntBASIC9.37□□□□□ -0.91
VPS8Q8N3P4 AC007998.1-201ENST00000474156 672 ntBASIC9.37□□□□□ -0.91
VPS8Q8N3P4 AC083795.1-201ENST00000491760 320 ntBASIC9.37□□□□□ -0.91
VPS8Q8N3P4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 OR11H2-202ENST00000641517 1085 ntBASIC9.37□□□□□ -0.91
VPS8Q8N3P4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
VPS8Q8N3P4 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 AC009135.2-201ENST00000624136 1768 ntBASIC9.36□□□□□ -0.91
VPS8Q8N3P4 AC009831.5-201ENST00000624000 3189 ntBASIC9.36□□□□□ -0.91
VPS8Q8N3P4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 OLMALINC-203ENST00000641087 3779 ntBASIC9.36□□□□□ -0.91
VPS8Q8N3P4 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 TPT1-204ENST00000379060 764 ntTSL 5 BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 FTH1P8-201ENST00000498161 514 ntBASIC9.36□□□□□ -0.91
VPS8Q8N3P4 CCDC11P1-201ENST00000503137 1162 ntBASIC9.36□□□□□ -0.91
VPS8Q8N3P4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 HMGN2P36-201ENST00000529541 409 ntBASIC9.36□□□□□ -0.91
VPS8Q8N3P4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 AC006530.1-201ENST00000555980 571 ntBASIC9.36□□□□□ -0.91
VPS8Q8N3P4 ZNF322P1-201ENST00000568013 1209 ntBASIC9.36□□□□□ -0.91
VPS8Q8N3P4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS8Q8N3P4 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms