Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
SCUBE3Q8IX30 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AC132825.1-201ENST00000463573 2247 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 CUL4AP1-201ENST00000514750 1863 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AC138393.1-206ENST00000540997 1886 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 RNA5SP263-201ENST00000363376 128 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 RNU6-374P-201ENST00000364146 108 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 Y_RNA.311-201ENST00000365068 96 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 CYCSP45-201ENST00000402289 315 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 RNU6-248P-201ENST00000410720 107 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AC004987.3-201ENST00000413879 771 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 RPL3P4-201ENST00000417615 423 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 USP9YP27-201ENST00000418455 438 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 NANOGP4-201ENST00000427230 913 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AL365184.2-201ENST00000431139 435 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 SCDP1-201ENST00000455244 1081 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 RPL7AP52-201ENST00000458096 790 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 RN7SL65P-201ENST00000485221 315 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AC113208.1-201ENST00000497944 318 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 KCTD9P4-201ENST00000526766 1166 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 OR5AN2P-201ENST00000534535 896 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 RN7SL785P-201ENST00000578437 253 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AC073091.2-201ENST00000603205 907 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AC138904.2-201ENST00000614412 107 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AL139089.1-201ENST00000620372 975 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AP000356.4-201ENST00000639500 172 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 AL133279.3-201ENST00000563140 2352 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 RARSP1-201ENST00000542842 1418 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 EEF1A1P2-201ENST00000553854 1447 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 MT-RNR2-201ENST00000387347 1559 ntBASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SCUBE3Q8IX30 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 AC007342.7-201ENST00000624610 2337 ntBASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 RNU1-47P-201ENST00000362966 163 ntBASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 Y_RNA.419-201ENST00000384041 102 ntBASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 MIR654-201ENST00000385199 81 ntBASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 SNORA40.3-201ENST00000390964 122 ntBASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 SNORD65-201ENST00000391079 73 ntBASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 AC009310.1-201ENST00000414414 451 ntBASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 CDC42P6-201ENST00000421246 576 ntBASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 TRIM43CP-201ENST00000422468 1028 ntBASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 VN1R20P-201ENST00000425215 966 ntBASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 AC108448.2-201ENST00000431546 730 ntBASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 AC092170.1-201ENST00000440211 356 ntBASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 AC093166.4-201ENST00000457867 318 ntBASIC8.51□□□□□ -1.05
SCUBE3Q8IX30 AC092757.1-201ENST00000467293 467 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms