Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC3.58□□□□□ -1.84
HSPG2P98160 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.58□□□□□ -1.84
HSPG2P98160 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC3.58□□□□□ -1.84
HSPG2P98160 AL049872.1-201ENST00000556323 322 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 AC011453.2-201ENST00000603737 729 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HSPG2P98160 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 ZNF658B-201ENST00000602828 3408 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
HSPG2P98160 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.58□□□□□ -1.84
HSPG2P98160 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
HSPG2P98160 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC3.58□□□□□ -1.84
HSPG2P98160 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC3.58□□□□□ -1.84
HSPG2P98160 SHPRH-206ENST00000438092 6994 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 MIR199B-201ENST00000384849 110 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 PTCD2P2-201ENST00000415579 1095 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 DUTP4-201ENST00000424782 475 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 KCTD10P1-201ENST00000434203 625 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 CYCSP6-201ENST00000434498 302 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 RN7SL570P-201ENST00000484405 292 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.58□□□□□ -1.84
HSPG2P98160 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HSPG2P98160 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HSPG2P98160 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
HSPG2P98160 AC112243.1-201ENST00000623949 3851 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC3.57□□□□□ -1.84
HSPG2P98160 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HSPG2P98160 AC013442.1-201ENST00000397347 228 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 AL389915.1-201ENST00000422463 466 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 AC016712.1-201ENST00000431088 378 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 HMGB3P24-201ENST00000433260 622 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 DNAJA1P6-201ENST00000437347 354 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 AC073648.4-201ENST00000442655 781 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 IGBP1P5-201ENST00000507524 1000 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC3.57□□□□□ -1.84
HSPG2P98160 AC100784.1-201ENST00000522790 310 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.57□□□□□ -1.84
HSPG2P98160 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
HSPG2P98160 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC3.57□□□□□ -1.84
HSPG2P98160 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 AC011493.1-201ENST00000596753 1632 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 Z97832.2-201ENST00000605896 4261 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 AP000866.6-201ENST00000638898 3579 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HSPG2P98160 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC3.57□□□□□ -1.84
HSPG2P98160 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC3.57□□□□□ -1.84
HSPG2P98160 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 RNA5SP335-201ENST00000363817 110 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 NMD3P2-201ENST00000421815 761 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC3.57□□□□□ -1.84
HSPG2P98160 RPL7P16-201ENST00000479738 738 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 AC026826.1-201ENST00000493002 361 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.57□□□□□ -1.84
HSPG2P98160 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HSPG2P98160 AC018558.5-201ENST00000565840 952 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 SS18L2P2-201ENST00000583960 235 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 AC012414.7-202ENST00000622705 1090 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC3.57□□□□□ -1.84
HSPG2P98160 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 BIN2P1-201ENST00000504996 1530 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 MAPK10-323ENST00000641493 3207 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC3.57□□□□□ -1.84
HSPG2P98160 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms