Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.63□□□□□ -1.35
HDAC4P56524 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HDAC4P56524 AL133260.1-201ENST00000405720 405 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 CYP4F30P-202ENST00000420048 405 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.63□□□□□ -1.35
HDAC4P56524 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.63□□□□□ -1.35
HDAC4P56524 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
HDAC4P56524 NPM1P48-201ENST00000436002 853 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 AL355355.1-201ENST00000442900 793 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.63□□□□□ -1.35
HDAC4P56524 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.63□□□□□ -1.35
HDAC4P56524 AC092967.1-201ENST00000449016 481 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC6.63□□□□□ -1.35
HDAC4P56524 RBMY2HP-201ENST00000457961 720 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 RN7SL39P-201ENST00000462264 297 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
HDAC4P56524 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 AP005639.1-201ENST00000526939 192 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.63□□□□□ -1.35
HDAC4P56524 AC124891.1-201ENST00000536322 519 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 BTG1P1-201ENST00000540396 508 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 AC009729.1-201ENST00000548873 1133 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
HDAC4P56524 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.63□□□□□ -1.35
HDAC4P56524 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.63□□□□□ -1.35
HDAC4P56524 MIR4433B-201ENST00000581329 102 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.63□□□□□ -1.35
HDAC4P56524 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.63□□□□□ -1.35
HDAC4P56524 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.63□□□□□ -1.35
HDAC4P56524 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 AC063977.7-201ENST00000594454 337 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.63□□□□□ -1.35
HDAC4P56524 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.63□□□□□ -1.35
HDAC4P56524 AL136984.1-201ENST00000607611 1893 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.63□□□□□ -1.35
HDAC4P56524 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
HDAC4P56524 AL118556.2-201ENST00000614375 824 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 MIR6823-201ENST00000622118 61 ntBASIC6.63□□□□□ -1.35
HDAC4P56524 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.63□□□□□ -1.35
HDAC4P56524 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
HDAC4P56524 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HDAC4P56524 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
HDAC4P56524 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HDAC4P56524 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 GUCY1B2-204ENST00000531898 1979 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.62□□□□□ -1.35
HDAC4P56524 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.62□□□□□ -1.35
HDAC4P56524 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
HDAC4P56524 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HDAC4P56524 CR383656.5-201ENST00000547616 1340 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
HDAC4P56524 OR11H13P-201ENST00000359695 979 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HDAC4P56524 RNA5SP115-201ENST00000411160 107 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 DHFRP2-201ENST00000414224 547 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.62□□□□□ -1.35
HDAC4P56524 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.62□□□□□ -1.35
HDAC4P56524 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC4P56524 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC4P56524 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC4P56524 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC4P56524 AC099670.1-201ENST00000455141 783 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 RARRES2P3-201ENST00000457739 473 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 AC044810.1-201ENST00000480271 711 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 GM2AP2-201ENST00000491764 562 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 SNORA48.9-201ENST00000516419 162 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.62□□□□□ -1.35
HDAC4P56524 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.62□□□□□ -1.35
HDAC4P56524 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC4P56524 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.62□□□□□ -1.35
HDAC4P56524 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC4P56524 AC008055.1-201ENST00000547032 609 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms