Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USP11P51784 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
USP11P51784 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.84□□□□□ -1.15
USP11P51784 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
USP11P51784 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USP11P51784 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
USP11P51784 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USP11P51784 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
USP11P51784 AC034111.1-201ENST00000562143 3770 ntBASIC7.84□□□□□ -1.16
USP11P51784 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.16
USP11P51784 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
USP11P51784 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
USP11P51784 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 AL512353.3-201ENST00000417517 1326 ntBASIC7.83□□□□□ -1.16
USP11P51784 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
USP11P51784 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.83□□□□□ -1.16
USP11P51784 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 Y_RNA.194-201ENST00000363985 102 ntBASIC7.83□□□□□ -1.16
USP11P51784 RN7SKP189-201ENST00000365042 330 ntBASIC7.83□□□□□ -1.16
USP11P51784 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 AL356131.1-201ENST00000405826 414 ntBASIC7.83□□□□□ -1.16
USP11P51784 RN7SKP91-201ENST00000410852 288 ntBASIC7.83□□□□□ -1.16
USP11P51784 AF274854.1-201ENST00000413236 615 ntBASIC7.83□□□□□ -1.16
USP11P51784 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 AC091492.1-201ENST00000419844 272 ntBASIC7.83□□□□□ -1.16
USP11P51784 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC7.83□□□□□ -1.16
USP11P51784 NPM1P33-201ENST00000438918 872 ntBASIC7.83□□□□□ -1.16
USP11P51784 RPL7P55-201ENST00000450522 746 ntBASIC7.83□□□□□ -1.16
USP11P51784 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.83□□□□□ -1.16
USP11P51784 AC108157.1-201ENST00000510511 539 ntBASIC7.83□□□□□ -1.16
USP11P51784 MRPS33P3-201ENST00000513456 322 ntBASIC7.83□□□□□ -1.16
USP11P51784 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.83□□□□□ -1.16
USP11P51784 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 PHBP2-201ENST00000532859 806 ntBASIC7.83□□□□□ -1.16
USP11P51784 AC016144.1-201ENST00000548175 1087 ntBASIC7.83□□□□□ -1.16
USP11P51784 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.83□□□□□ -1.16
USP11P51784 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC7.83□□□□□ -1.16
USP11P51784 MTND4P33-201ENST00000556706 766 ntBASIC7.83□□□□□ -1.16
USP11P51784 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.83□□□□□ -1.16
USP11P51784 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC7.83□□□□□ -1.16
USP11P51784 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.83□□□□□ -1.16
USP11P51784 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.83□□□□□ -1.16
USP11P51784 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 AP002802.2-201ENST00000605877 235 ntBASIC7.83□□□□□ -1.16
USP11P51784 AC004908.1-201ENST00000606572 541 ntBASIC7.83□□□□□ -1.16
USP11P51784 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.83□□□□□ -1.16
USP11P51784 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC7.83□□□□□ -1.16
USP11P51784 MIR6070-201ENST00000613967 103 ntBASIC7.83□□□□□ -1.16
USP11P51784 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.83□□□□□ -1.16
USP11P51784 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.83□□□□□ -1.16
USP11P51784 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.83□□□□□ -1.16
USP11P51784 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 AC007671.2-201ENST00000637344 619 ntBASIC7.83□□□□□ -1.16
USP11P51784 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 AC139713.2-210ENST00000641741 992 ntBASIC7.83□□□□□ -1.16
USP11P51784 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
USP11P51784 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.83□□□□□ -1.16
USP11P51784 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
USP11P51784 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USP11P51784 CASC19-255ENST00000641733 1385 ntBASIC7.83□□□□□ -1.16
USP11P51784 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.83□□□□□ -1.16
USP11P51784 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.83□□□□□ -1.16
USP11P51784 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USP11P51784 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USP11P51784 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USP11P51784 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USP11P51784 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
USP11P51784 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
USP11P51784 AC009237.3-203ENST00000442128 3551 ntBASIC7.82□□□□□ -1.16
USP11P51784 RNA5SP152-201ENST00000365184 110 ntBASIC7.82□□□□□ -1.16
USP11P51784 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USP11P51784 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
USP11P51784 RNU6-354P-201ENST00000383862 107 ntBASIC7.82□□□□□ -1.16
USP11P51784 RNU6-610P-201ENST00000384264 107 ntBASIC7.82□□□□□ -1.16
USP11P51784 LDHAP5-201ENST00000394996 622 ntBASIC7.82□□□□□ -1.16
USP11P51784 AC008171.1-201ENST00000395058 200 ntBASIC7.82□□□□□ -1.16
USP11P51784 NIFKP3-201ENST00000417799 865 ntBASIC7.82□□□□□ -1.16
USP11P51784 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms