Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 AP001052.1-201ENST00000626421 99 ntBASIC6.57□□□□□ -1.36
RXRGP48443 SMG1P5-202ENST00000529428 4219 ntBASIC6.57□□□□□ -1.36
RXRGP48443 SMG1P2-201ENST00000566127 4221 ntBASIC6.57□□□□□ -1.36
RXRGP48443 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RXRGP48443 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.57□□□□□ -1.36
RXRGP48443 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RXRGP48443 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RXRGP48443 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RXRGP48443 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RXRGP48443 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RXRGP48443 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.57□□□□□ -1.36
RXRGP48443 PROS2P-201ENST00000474651 1951 ntBASIC6.57□□□□□ -1.36
RXRGP48443 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
RXRGP48443 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRGP48443 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRGP48443 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRGP48443 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRGP48443 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRGP48443 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRGP48443 AL591848.4-201ENST00000567832 3472 ntBASIC6.56□□□□□ -1.36
RXRGP48443 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.56□□□□□ -1.36
RXRGP48443 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRGP48443 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRGP48443 AC003985.2-201ENST00000562268 1669 ntBASIC6.56□□□□□ -1.36
RXRGP48443 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRGP48443 RNU6-618P-201ENST00000363518 112 ntBASIC6.56□□□□□ -1.36
RXRGP48443 RN7SKP15-201ENST00000364742 309 ntBASIC6.56□□□□□ -1.36
RXRGP48443 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.56□□□□□ -1.36
RXRGP48443 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RXRGP48443 RBBP4P5-201ENST00000398583 1266 ntBASIC6.56□□□□□ -1.36
RXRGP48443 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RXRGP48443 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.56□□□□□ -1.36
RXRGP48443 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RXRGP48443 AC079807.1-201ENST00000429993 481 ntBASIC6.56□□□□□ -1.36
RXRGP48443 H3F3BP1-201ENST00000440551 403 ntBASIC6.56□□□□□ -1.36
RXRGP48443 GAPDHP33-201ENST00000443168 1013 ntBASIC6.56□□□□□ -1.36
RXRGP48443 POU5F1P5-201ENST00000445059 658 ntBASIC6.56□□□□□ -1.36
RXRGP48443 RPL31P20-201ENST00000449593 360 ntBASIC6.56□□□□□ -1.36
RXRGP48443 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.56□□□□□ -1.36
RXRGP48443 H3F3AP5-201ENST00000475267 429 ntBASIC6.56□□□□□ -1.36
RXRGP48443 AC117395.1-201ENST00000487390 403 ntBASIC6.56□□□□□ -1.36
RXRGP48443 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
RXRGP48443 MAST4-IT1-201ENST00000514241 658 ntBASIC6.56□□□□□ -1.36
RXRGP48443 HSD3BP3-201ENST00000514706 994 ntBASIC6.56□□□□□ -1.36
RXRGP48443 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.56□□□□□ -1.36
RXRGP48443 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.56□□□□□ -1.36
RXRGP48443 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.56□□□□□ -1.36
RXRGP48443 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.56□□□□□ -1.36
RXRGP48443 NDUFA5P11-201ENST00000567995 343 ntBASIC6.56□□□□□ -1.36
RXRGP48443 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.56□□□□□ -1.36
RXRGP48443 CTSLP2-201ENST00000580501 394 ntBASIC6.56□□□□□ -1.36
RXRGP48443 SYPL1P2-201ENST00000582878 727 ntBASIC6.56□□□□□ -1.36
RXRGP48443 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.56□□□□□ -1.36
RXRGP48443 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.56□□□□□ -1.36
RXRGP48443 RPL12P48-201ENST00000605620 304 ntBASIC6.56□□□□□ -1.36
RXRGP48443 AC093635.1-201ENST00000609028 555 ntBASIC6.56□□□□□ -1.36
RXRGP48443 AL352984.2-202ENST00000613699 155 ntBASIC6.56□□□□□ -1.36
RXRGP48443 MIR6861-201ENST00000618657 64 ntBASIC6.56□□□□□ -1.36
RXRGP48443 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.56□□□□□ -1.36
RXRGP48443 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.56□□□□□ -1.36
RXRGP48443 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.56□□□□□ -1.36
RXRGP48443 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RXRGP48443 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RXRGP48443 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RXRGP48443 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
RXRGP48443 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.56□□□□□ -1.36
RXRGP48443 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RXRGP48443 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.56□□□□□ -1.36
RXRGP48443 AC011504.1-201ENST00000623331 4103 ntBASIC6.56□□□□□ -1.36
RXRGP48443 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.56□□□□□ -1.36
RXRGP48443 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRGP48443 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRGP48443 AC123769.1-201ENST00000530992 3192 ntBASIC6.55□□□□□ -1.36
RXRGP48443 AL442128.2-201ENST00000620246 1824 ntBASIC6.55□□□□□ -1.36
RXRGP48443 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.55□□□□□ -1.36
RXRGP48443 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RXRGP48443 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 Z97989.1-201ENST00000531702 2421 ntBASIC6.55□□□□□ -1.36
RXRGP48443 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RXRGP48443 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRGP48443 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RXRGP48443 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 OR2W4P-201ENST00000406496 926 ntBASIC6.55□□□□□ -1.36
RXRGP48443 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.55□□□□□ -1.36
RXRGP48443 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRGP48443 AC239367.3-201ENST00000428996 814 ntBASIC6.55□□□□□ -1.36
RXRGP48443 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRGP48443 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRGP48443 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.55□□□□□ -1.36
RXRGP48443 AC016724.1-201ENST00000453215 421 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms