Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.83□□□□□ -1.32
COL11A1P12107 AC145423.1-201ENST00000605712 336 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.83□□□□□ -1.32
COL11A1P12107 AC087269.2-201ENST00000641764 975 ntBASIC6.83□□□□□ -1.32
COL11A1P12107 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL11A1P12107 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL11A1P12107 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL11A1P12107 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL11A1P12107 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
COL11A1P12107 PARP4P2-201ENST00000446672 3326 ntBASIC6.82□□□□□ -1.32
COL11A1P12107 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL11A1P12107 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL11A1P12107 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL11A1P12107 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL11A1P12107 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
COL11A1P12107 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
COL11A1P12107 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL11A1P12107 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.82□□□□□ -1.32
COL11A1P12107 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL11A1P12107 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL11A1P12107 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COL11A1P12107 RN7SKP124-201ENST00000364730 341 ntBASIC6.82□□□□□ -1.32
COL11A1P12107 AC008171.1-201ENST00000395058 200 ntBASIC6.82□□□□□ -1.32
COL11A1P12107 RN7SKP29-201ENST00000410957 272 ntBASIC6.82□□□□□ -1.32
COL11A1P12107 OR6E1P-201ENST00000414424 923 ntBASIC6.82□□□□□ -1.32
COL11A1P12107 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.82□□□□□ -1.32
COL11A1P12107 VN1R110P-201ENST00000438988 971 ntBASIC6.82□□□□□ -1.32
COL11A1P12107 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.82□□□□□ -1.32
COL11A1P12107 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.82□□□□□ -1.32
COL11A1P12107 AC068522.1-201ENST00000482895 345 ntBASIC6.82□□□□□ -1.32
COL11A1P12107 AL136038.1-201ENST00000497246 351 ntBASIC6.82□□□□□ -1.32
COL11A1P12107 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL11A1P12107 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.82□□□□□ -1.32
COL11A1P12107 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.82□□□□□ -1.32
COL11A1P12107 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.82□□□□□ -1.32
COL11A1P12107 AC079600.1-201ENST00000550326 297 ntBASIC6.82□□□□□ -1.32
COL11A1P12107 AC007225.2-201ENST00000562529 256 ntBASIC6.82□□□□□ -1.32
COL11A1P12107 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.82□□□□□ -1.32
COL11A1P12107 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.82□□□□□ -1.32
COL11A1P12107 CR788268.1-201ENST00000603931 1809 ntBASIC6.82□□□□□ -1.32
COL11A1P12107 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL11A1P12107 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL11A1P12107 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL11A1P12107 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.82□□□□□ -1.32
COL11A1P12107 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.82□□□□□ -1.32
COL11A1P12107 RBPJP7-201ENST00000442803 1447 ntBASIC6.81□□□□□ -1.32
COL11A1P12107 RBPJP5-201ENST00000449433 1447 ntBASIC6.81□□□□□ -1.32
COL11A1P12107 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.81□□□□□ -1.32
COL11A1P12107 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL11A1P12107 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
COL11A1P12107 RN7SKP128-201ENST00000364270 303 ntBASIC6.81□□□□□ -1.32
COL11A1P12107 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.81□□□□□ -1.32
COL11A1P12107 PTCD2P2-201ENST00000415579 1095 ntBASIC6.81□□□□□ -1.32
COL11A1P12107 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.81□□□□□ -1.32
COL11A1P12107 AC113412.1-201ENST00000425840 504 ntBASIC6.81□□□□□ -1.32
COL11A1P12107 AC099677.3-201ENST00000427081 395 ntBASIC6.81□□□□□ -1.32
COL11A1P12107 HMGB3P24-201ENST00000433260 622 ntBASIC6.81□□□□□ -1.32
COL11A1P12107 RPL36AP39-201ENST00000445859 318 ntBASIC6.81□□□□□ -1.32
COL11A1P12107 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.81□□□□□ -1.32
COL11A1P12107 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.81□□□□□ -1.32
COL11A1P12107 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.81□□□□□ -1.32
COL11A1P12107 RNU6-615P-201ENST00000516065 106 ntBASIC6.81□□□□□ -1.32
COL11A1P12107 CYCSP22-201ENST00000517555 339 ntBASIC6.81□□□□□ -1.32
COL11A1P12107 WBP1LP3-201ENST00000523033 208 ntBASIC6.81□□□□□ -1.32
COL11A1P12107 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.81□□□□□ -1.32
COL11A1P12107 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.81□□□□□ -1.32
COL11A1P12107 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.81□□□□□ -1.32
COL11A1P12107 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
COL11A1P12107 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL11A1P12107 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL11A1P12107 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.81□□□□□ -1.32
COL11A1P12107 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL11A1P12107 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL11A1P12107 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL11A1P12107 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL11A1P12107 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.81□□□□□ -1.32
COL11A1P12107 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL11A1P12107 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL11A1P12107 AC027279.4-201ENST00000624371 2072 ntBASIC6.81□□□□□ -1.32
COL11A1P12107 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL11A1P12107 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.81□□□□□ -1.32
COL11A1P12107 AC006213.6-201ENST00000623722 4179 ntBASIC6.81□□□□□ -1.32
COL11A1P12107 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.81□□□□□ -1.32
COL11A1P12107 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
COL11A1P12107 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
COL11A1P12107 OR10R3P-201ENST00000361688 942 ntBASIC6.8□□□□□ -1.32
COL11A1P12107 RNA5SP394-201ENST00000364216 119 ntBASIC6.8□□□□□ -1.32
COL11A1P12107 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.8□□□□□ -1.32
COL11A1P12107 TUBB4BP6-201ENST00000437576 479 ntBASIC6.8□□□□□ -1.32
COL11A1P12107 AC011225.1-201ENST00000457751 369 ntBASIC6.8□□□□□ -1.32
COL11A1P12107 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.8□□□□□ -1.32
COL11A1P12107 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.8□□□□□ -1.32
COL11A1P12107 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.8□□□□□ -1.32
COL11A1P12107 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.8□□□□□ -1.32
COL11A1P12107 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms