Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CHGAP10645 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHGAP10645 AC091173.1-201ENST00000505627 2750 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CHGAP10645 AC073055.1-201ENST00000456901 1621 ntBASIC10.9□□□□□ -0.66
CHGAP10645 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
CHGAP10645 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC10.9□□□□□ -0.66
CHGAP10645 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
CHGAP10645 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CHGAP10645 AL022163.1-201ENST00000430261 1569 ntBASIC10.9□□□□□ -0.67
CHGAP10645 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC10.9□□□□□ -0.67
CHGAP10645 MITF-203ENST00000328528 4680 ntTSL 5 BASIC10.9□□□□□ -0.67
CHGAP10645 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
CHGAP10645 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC10.89□□□□□ -0.67
CHGAP10645 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC10.89□□□□□ -0.67
CHGAP10645 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
CHGAP10645 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 AL078621.1-201ENST00000272567 768 ntBASIC10.89□□□□□ -0.67
CHGAP10645 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 RNU4-81P-201ENST00000363561 144 ntBASIC10.89□□□□□ -0.67
CHGAP10645 RPS27AP11-201ENST00000402798 447 ntBASIC10.89□□□□□ -0.67
CHGAP10645 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 RPSAP72-201ENST00000407020 358 ntBASIC10.89□□□□□ -0.67
CHGAP10645 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC10.89□□□□□ -0.67
CHGAP10645 NPM1P4-201ENST00000414095 812 ntBASIC10.89□□□□□ -0.67
CHGAP10645 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC10.89□□□□□ -0.67
CHGAP10645 USP9YP18-201ENST00000425912 695 ntBASIC10.89□□□□□ -0.67
CHGAP10645 OR5AW1P-201ENST00000426334 1006 ntBASIC10.89□□□□□ -0.67
CHGAP10645 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 RPL34P27-201ENST00000428810 349 ntBASIC10.89□□□□□ -0.67
CHGAP10645 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC10.89□□□□□ -0.67
CHGAP10645 AC013403.1-201ENST00000436954 263 ntBASIC10.89□□□□□ -0.67
CHGAP10645 AC093155.1-201ENST00000440164 826 ntBASIC10.89□□□□□ -0.67
CHGAP10645 RPL23AP76-201ENST00000441860 458 ntBASIC10.89□□□□□ -0.67
CHGAP10645 AC112653.1-201ENST00000443851 386 ntBASIC10.89□□□□□ -0.67
CHGAP10645 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC10.89□□□□□ -0.67
CHGAP10645 PPIAP32-201ENST00000449940 472 ntBASIC10.89□□□□□ -0.67
CHGAP10645 AC009244.1-201ENST00000450566 258 ntBASIC10.89□□□□□ -0.67
CHGAP10645 EIF4E2P2-201ENST00000492033 736 ntBASIC10.89□□□□□ -0.67
CHGAP10645 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC10.89□□□□□ -0.67
CHGAP10645 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC10.89□□□□□ -0.67
CHGAP10645 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC10.89□□□□□ -0.67
CHGAP10645 AC107952.1-201ENST00000524200 376 ntBASIC10.89□□□□□ -0.67
CHGAP10645 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC10.89□□□□□ -0.67
CHGAP10645 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC10.89□□□□□ -0.67
CHGAP10645 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC10.89□□□□□ -0.67
CHGAP10645 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC10.89□□□□□ -0.67
CHGAP10645 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC10.89□□□□□ -0.67
CHGAP10645 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC10.89□□□□□ -0.67
CHGAP10645 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC10.89□□□□□ -0.67
CHGAP10645 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC10.89□□□□□ -0.67
CHGAP10645 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 GYG2-209ENST00000639373 2900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
CHGAP10645 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC10.89□□□□□ -0.67
CHGAP10645 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC10.89□□□□□ -0.67
CHGAP10645 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHGAP10645 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC10.89□□□□□ -0.67
CHGAP10645 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CHGAP10645 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC10.89□□□□□ -0.67
CHGAP10645 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC10.89□□□□□ -0.67
CHGAP10645 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC10.89□□□□□ -0.67
CHGAP10645 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHGAP10645 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHGAP10645 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC10.88□□□□□ -0.67
CHGAP10645 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
CHGAP10645 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
CHGAP10645 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHGAP10645 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CHGAP10645 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHGAP10645 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CHGAP10645 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CHGAP10645 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CHGAP10645 SSX6-201ENST00000376932 562 ntBASIC10.88□□□□□ -0.67
CHGAP10645 RNY3P10-201ENST00000384764 102 ntBASIC10.88□□□□□ -0.67
CHGAP10645 U3.18-201ENST00000390880 216 ntBASIC10.88□□□□□ -0.67
CHGAP10645 NUS1P4-201ENST00000401550 585 ntBASIC10.88□□□□□ -0.67
CHGAP10645 RN7SKP161-201ENST00000411110 305 ntBASIC10.88□□□□□ -0.67
CHGAP10645 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC10.88□□□□□ -0.67
CHGAP10645 TCEA1P4-201ENST00000415066 844 ntBASIC10.88□□□□□ -0.67
CHGAP10645 ATG4AP1-201ENST00000416893 538 ntBASIC10.88□□□□□ -0.67
CHGAP10645 NENFP1-201ENST00000419476 466 ntBASIC10.88□□□□□ -0.67
CHGAP10645 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC10.88□□□□□ -0.67
CHGAP10645 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC10.88□□□□□ -0.67
CHGAP10645 AL035458.1-201ENST00000433096 585 ntBASIC10.88□□□□□ -0.67
CHGAP10645 B3GNT2P1-201ENST00000434960 952 ntBASIC10.88□□□□□ -0.67
CHGAP10645 RPL29P7-201ENST00000440227 457 ntBASIC10.88□□□□□ -0.67
CHGAP10645 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC10.88□□□□□ -0.67
CHGAP10645 YAP1P2-201ENST00000455104 610 ntBASIC10.88□□□□□ -0.67
CHGAP10645 TFP1-201ENST00000460564 572 ntTSL 4 BASIC10.88□□□□□ -0.67
CHGAP10645 RPS20P4-201ENST00000461659 355 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms