Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6□□□□□ -1.45
RAB40ALP0C0E4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
RAB40ALP0C0E4 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RAB40ALP0C0E4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RAB40ALP0C0E4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6□□□□□ -1.45
RAB40ALP0C0E4 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
RAB40ALP0C0E4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6□□□□□ -1.45
RAB40ALP0C0E4 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 RNF19BPY-201ENST00000458209 1550 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 COX6B1P3-201ENST00000312310 260 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 SNORA70H-201ENST00000383910 135 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 SNORA70J-201ENST00000384182 135 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AL023284.3-201ENST00000407767 334 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 EIF5AP4-201ENST00000441206 465 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 RPL6P30-201ENST00000443382 862 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AC068228.1-201ENST00000461723 211 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AC094085.1-201ENST00000468914 584 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AC022415.1-202ENST00000486612 523 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 RN7SL714P-201ENST00000487050 298 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 LSM3P4-201ENST00000502948 309 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 SNX18P24-201ENST00000505249 671 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AC091965.3-201ENST00000506236 208 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 OR4D12P-201ENST00000509361 911 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AC110056.1-201ENST00000525759 911 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 KCTD9P4-201ENST00000526766 1166 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 RN7SL475P-201ENST00000583379 298 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 GLYATL1P2-202ENST00000588046 902 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AC091167.5-201ENST00000605689 894 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AL365181.4-201ENST00000609800 547 ntBASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAB40ALP0C0E4 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 AC010624.4-201ENST00000597606 1351 ntBASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 MTCO1P22-201ENST00000604619 1360 ntBASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 RNA5SP350-201ENST00000363298 111 ntBASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 AC004386.1-201ENST00000393214 761 ntBASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 SNORA77.2-201ENST00000408571 112 ntBASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 AL590004.3-202ENST00000445883 451 ntBASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 RPL12P24-201ENST00000474907 486 ntBASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 RN7SL326P-201ENST00000477493 296 ntBASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 RBBP4P1-201ENST00000502424 1276 ntBASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 MORF4L2P1-201ENST00000503761 858 ntBASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 AC147055.1-201ENST00000509261 750 ntBASIC5.98□□□□□ -1.45
RAB40ALP0C0E4 AC106800.3-201ENST00000511389 308 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms