Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AL158068.1-201ENST00000506116 616 ntBASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 HSD3BP3-201ENST00000514706 994 ntBASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC008429.4-201ENST00000521201 182 ntBASIC6.16□□□□□ -1.42
HLA-DQB2P05538 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC002519.2-203ENST00000567043 837 ntBASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC068768.2-201ENST00000602352 343 ntBASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC092681.3-201ENST00000609463 678 ntBASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC096861.1-201ENST00000616652 240 ntBASIC6.16□□□□□ -1.42
HLA-DQB2P05538 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AL731532.1-201ENST00000623972 4236 ntBASIC6.16□□□□□ -1.42
HLA-DQB2P05538 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 RBMY1HP-201ENST00000382759 1389 ntBASIC6.16□□□□□ -1.42
HLA-DQB2P05538 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 OR10R3P-201ENST00000361688 942 ntBASIC6.15□□□□□ -1.42
HLA-DQB2P05538 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AC068138.1-201ENST00000412635 217 ntBASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 NPM1P36-201ENST00000415681 835 ntBASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AL353662.1-201ENST00000439099 327 ntBASIC6.15□□□□□ -1.42
HLA-DQB2P05538 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 SUMO2P10-201ENST00000452006 288 ntBASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AC124945.1-201ENST00000485133 188 ntBASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 IGKV3D-25-201ENST00000519599 235 ntBASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AC119403.2-201ENST00000590960 598 ntBASIC6.15□□□□□ -1.42
HLA-DQB2P05538 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 uc_338.26-201ENST00000612659 160 ntBASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AC004801.6-201ENST00000616571 978 ntBASIC6.15□□□□□ -1.42
HLA-DQB2P05538 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AL357562.1-201ENST00000624911 609 ntBASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AL596275.2-207ENST00000641188 675 ntBASIC6.15□□□□□ -1.42
HLA-DQB2P05538 AC087269.2-201ENST00000641764 975 ntBASIC6.15□□□□□ -1.42
HLA-DQB2P05538 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-DQB2P05538 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-DQB2P05538 AP003486.1-201ENST00000525716 3994 ntBASIC6.15□□□□□ -1.43
HLA-DQB2P05538 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.15□□□□□ -1.43
HLA-DQB2P05538 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
HLA-DQB2P05538 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-DQB2P05538 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-DQB2P05538 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.15□□□□□ -1.43
HLA-DQB2P05538 AL354854.1-201ENST00000455940 1363 ntBASIC6.15□□□□□ -1.43
HLA-DQB2P05538 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
HLA-DQB2P05538 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
HLA-DQB2P05538 AL662795.2-201ENST00000624252 3706 ntBASIC6.15□□□□□ -1.43
HLA-DQB2P05538 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.15□□□□□ -1.43
HLA-DQB2P05538 MTCO1P28-201ENST00000574177 1528 ntBASIC6.15□□□□□ -1.43
HLA-DQB2P05538 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AC008627.1-201ENST00000517511 1704 ntBASIC6.14□□□□□ -1.43
HLA-DQB2P05538 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HLA-DQB2P05538 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms