Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC106800.3-201ENST00000511389 308 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.84□□□□□ -1.31
FOXN3O00409 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.84□□□□□ -1.31
FOXN3O00409 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.84□□□□□ -1.31
FOXN3O00409 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXN3O00409 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.84□□□□□ -1.31
FOXN3O00409 CASP1P2-201ENST00000526830 1258 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.84□□□□□ -1.31
FOXN3O00409 RPL3P13-201ENST00000550415 216 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.84□□□□□ -1.31
FOXN3O00409 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXN3O00409 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.84□□□□□ -1.31
FOXN3O00409 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.84□□□□□ -1.31
FOXN3O00409 AC024589.2-201ENST00000605642 1294 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.84□□□□□ -1.31
FOXN3O00409 AC068726.1-201ENST00000610993 341 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 AL512506.1-201ENST00000613918 449 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 AC074276.2-201ENST00000619891 348 ntBASIC6.84□□□□□ -1.31
FOXN3O00409 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.84□□□□□ -1.31
FOXN3O00409 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.84□□□□□ -1.31
FOXN3O00409 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.84□□□□□ -1.31
FOXN3O00409 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.84□□□□□ -1.31
FOXN3O00409 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXN3O00409 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
FOXN3O00409 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.84□□□□□ -1.32
FOXN3O00409 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.84□□□□□ -1.32
FOXN3O00409 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
FOXN3O00409 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
FOXN3O00409 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.83□□□□□ -1.32
FOXN3O00409 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXN3O00409 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
FOXN3O00409 RN7SKP161-201ENST00000411110 305 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 UBTFL2-201ENST00000411859 1191 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXN3O00409 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXN3O00409 NPM1P26-201ENST00000426339 738 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
FOXN3O00409 RAB9AP5-201ENST00000437794 597 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.83□□□□□ -1.32
FOXN3O00409 RAB9AP2-201ENST00000443911 597 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.83□□□□□ -1.32
FOXN3O00409 AP003385.3-201ENST00000472498 287 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 OR9A1P-202ENST00000484361 945 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.83□□□□□ -1.32
FOXN3O00409 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.83□□□□□ -1.32
FOXN3O00409 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.83□□□□□ -1.32
FOXN3O00409 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.83□□□□□ -1.32
FOXN3O00409 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.83□□□□□ -1.32
FOXN3O00409 RNA5SP116-201ENST00000516132 98 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 COX6B1P4-201ENST00000519826 484 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.83□□□□□ -1.32
FOXN3O00409 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 AC074029.2-201ENST00000551045 634 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.83□□□□□ -1.32
FOXN3O00409 AC023968.1-201ENST00000560719 475 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.83□□□□□ -1.32
FOXN3O00409 AC024267.2-201ENST00000582737 417 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 SYPL1P2-201ENST00000582878 727 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXN3O00409 AL589863.1-201ENST00000595383 631 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXN3O00409 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.83□□□□□ -1.32
FOXN3O00409 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXN3O00409 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXN3O00409 AL137246.2-201ENST00000613439 662 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.83□□□□□ -1.32
FOXN3O00409 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.83□□□□□ -1.32
FOXN3O00409 AC116158.1-201ENST00000560231 2129 ntBASIC6.83□□□□□ -1.32
FOXN3O00409 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.83□□□□□ -1.32
FOXN3O00409 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
FOXN3O00409 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXN3O00409 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
FOXN3O00409 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
FOXN3O00409 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
FOXN3O00409 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
FOXN3O00409 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXN3O00409 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.82□□□□□ -1.32
FOXN3O00409 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
FOXN3O00409 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXN3O00409 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
FOXN3O00409 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
FOXN3O00409 SNORD16-201ENST00000362803 99 ntBASIC6.82□□□□□ -1.32
FOXN3O00409 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.82□□□□□ -1.32
FOXN3O00409 UBE2V1P14-201ENST00000415815 558 ntBASIC6.82□□□□□ -1.32
FOXN3O00409 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.82□□□□□ -1.32
FOXN3O00409 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXN3O00409 AC128677.1-201ENST00000436016 442 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms