Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 MIR365B-201ENST00000362317 111 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 AL360271.1-201ENST00000395679 510 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 ARSFP1-201ENST00000398758 477 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AC007562.1-201ENST00000421819 517 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 RCC2P2-201ENST00000422174 918 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 AC007064.3-201ENST00000422608 359 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AC023274.2-201ENST00000445264 521 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 AL022319.1-201ENST00000458183 1167 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AC026616.1-201ENST00000523157 525 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 AC131935.1-201ENST00000524621 333 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 AP001804.1-201ENST00000526868 919 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AL021368.3-201ENST00000607119 578 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 AL589743.6-201ENST00000611025 117 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 AL352984.2-202ENST00000613699 155 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.08□□□□□ -1.6
SRRM4A7MD48 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 SMG1P5-202ENST00000529428 4219 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 SMG1P2-201ENST00000566127 4221 ntBASIC5.08□□□□□ -1.6
SRRM4A7MD48 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRRM4A7MD48 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRRM4A7MD48 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRRM4A7MD48 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRRM4A7MD48 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRRM4A7MD48 AP001541.1-201ENST00000623322 1904 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRRM4A7MD48 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRRM4A7MD48 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 AC092692.1-201ENST00000623625 2595 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 RN7SKP237-201ENST00000364663 301 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 MIR433-201ENST00000384837 93 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 RNU11-6P-201ENST00000391127 133 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 UBTFL2-201ENST00000411859 1191 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 RPS21P8-201ENST00000413365 247 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 CDY17P-201ENST00000414121 1282 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 CDY8P-201ENST00000428380 1279 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 AL645939.3-201ENST00000435408 225 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 AC234771.4-201ENST00000441416 730 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 CDY20P-201ENST00000447528 1279 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 AP003385.3-201ENST00000472498 287 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 RPL5P12-201ENST00000477071 851 ntBASIC5.07□□□□□ -1.6
SRRM4A7MD48 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.07□□□□□ -1.6
SRRM4A7MD48 RNA5SP418-201ENST00000515951 117 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms