Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 DUTP5-201ENST00000406790 469 ntBASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 RPS7P3-201ENST00000443360 580 ntBASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 NUTF2P7-201ENST00000453086 375 ntBASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 AC104164.1-201ENST00000460282 590 ntBASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 AC090114.3-201ENST00000479267 829 ntBASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 RPL32P33-201ENST00000487023 394 ntBASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 AC130456.6-201ENST00000623745 765 ntBASIC9.42□□□□□ -0.9
RIMBP3Q9UFD9 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 OR5W1P-201ENST00000423705 938 ntBASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 RPS23P7-201ENST00000466210 444 ntBASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 RN7SL561P-201ENST00000488553 281 ntBASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 IGHVIII-2-1-201ENST00000518843 291 ntBASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 AC100784.1-201ENST00000522790 310 ntBASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 AL020997.2-201ENST00000602607 184 ntBASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 AL109618.2-201ENST00000605527 211 ntBASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 CASC19-281ENST00000642118 1554 ntBASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
RIMBP3Q9UFD9 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 AC062022.1-201ENST00000451026 1684 ntBASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 AC091046.3-201ENST00000631455 1574 ntBASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 CYP4F32P-201ENST00000426492 504 ntBASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 AC026979.1-201ENST00000492525 396 ntBASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 RPL27-207ENST00000590864 569 ntTSL 2 BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 AL953862.2-201ENST00000603089 820 ntBASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
RIMBP3Q9UFD9 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
RIMBP3Q9UFD9 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
RIMBP3Q9UFD9 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.91
RIMBP3Q9UFD9 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
RIMBP3Q9UFD9 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
RIMBP3Q9UFD9 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
RIMBP3Q9UFD9 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 RN7SKP28-201ENST00000364770 305 ntBASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 RNU6-398P-201ENST00000384143 109 ntBASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 AC019050.1-201ENST00000418508 492 ntBASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 AC093162.1-201ENST00000419682 124 ntBASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 AC073648.4-201ENST00000442655 781 ntBASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 OR56A7P-201ENST00000524865 941 ntBASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 AC000068.2-201ENST00000608816 460 ntBASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RIMBP3Q9UFD9 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms