Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 KRT7-214ENST00000638501 398 ntTSL 5 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 IST1-226ENST00000606369 3583 ntTSL 2 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 MSS51-201ENST00000299432 2421 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 Z93929.1-201ENST00000418200 1475 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 TRAF6P1-201ENST00000429404 1558 ntBASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
COL25A1Q9BXS0 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 TMPRSS4-220ENST00000618855 3531 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 ZC3H7A-201ENST00000355758 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 CTAGE9-201ENST00000314099 2334 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AP000446.1-201ENST00000530045 2643 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 RNU6-500P-201ENST00000362349 107 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 RN7SKP77-201ENST00000363261 353 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 RNU6-254P-201ENST00000363377 107 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 U6.112-201ENST00000384129 70 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 RNU6-738P-201ENST00000384531 106 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 RNA5SP185-201ENST00000390963 114 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 RANP4-201ENST00000413361 655 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AC007390.1-201ENST00000415722 356 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 C1DP1-201ENST00000426049 402 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 TCEA1P3-201ENST00000443005 880 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 Z83838.1-202ENST00000456225 839 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 RPL29P25-201ENST00000465069 850 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 RN7SL174P-201ENST00000475578 289 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AC147055.4-201ENST00000504399 745 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 HPRT1P2-201ENST00000505250 544 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AC104090.1-201ENST00000506341 1171 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 RN7SKP298-201ENST00000515950 94 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AC091982.1-201ENST00000518134 520 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 PDCD5P1-201ENST00000543528 309 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AC018714.1-201ENST00000605028 208 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AC008536.2-201ENST00000607284 349 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 AC009148.1-201ENST00000570148 2693 ntBASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 ACSL6-212ENST00000431707 2060 ntTSL 5 BASIC7.79□□□□□ -1.16
COL25A1Q9BXS0 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 HERC2P3-206ENST00000429257 4088 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 MAB21L3-201ENST00000369500 3229 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC092111.2-201ENST00000611627 1414 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 AC010533.1-201ENST00000624875 2105 ntBASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 XKRX-201ENST00000372956 2848 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
COL25A1Q9BXS0 NVL-203ENST00000391875 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms