Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AP000240.1-201ENST00000609910 452 ntBASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 LINC02495-203ENST00000636704 242 ntBASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 AC125238.2-201ENST00000430003 1440 ntBASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 AC112243.1-201ENST00000623949 3851 ntBASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AL359976.1-201ENST00000418655 3528 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 DNM1P47-203ENST00000571780 12667 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 RPL31P11-201ENST00000426558 1558 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 RN7SKP281-201ENST00000410472 352 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AL139184.1-202ENST00000422303 222 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AL157884.1-201ENST00000424561 454 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AC097721.1-201ENST00000427150 1253 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 OR52Y1P-201ENST00000452418 828 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 C1DP3-201ENST00000455013 423 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AC233702.7-202ENST00000582941 211 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AC090616.1-201ENST00000583895 447 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 MIR212-201ENST00000586026 110 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AC026790.2-201ENST00000606282 430 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 TCL6_3.1-201ENST00000619064 137 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AC211486.4-201ENST00000621495 113 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 AC217777.1-201ENST00000570034 1471 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 OLMALINC-203ENST00000641087 3779 ntBASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.22□□□□□ -1.25
CDK5RAP3Q96JB5 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CDK5RAP3Q96JB5 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.21□□□□□ -1.25
CDK5RAP3Q96JB5 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
CDK5RAP3Q96JB5 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDK5RAP3Q96JB5 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDK5RAP3Q96JB5 AC119674.1-213ENST00000641177 1386 ntBASIC7.21□□□□□ -1.25
CDK5RAP3Q96JB5 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CDK5RAP3Q96JB5 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.25
CDK5RAP3Q96JB5 CCAT2-201ENST00000630920 1752 ntBASIC7.21□□□□□ -1.25
CDK5RAP3Q96JB5 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.21□□□□□ -1.25
CDK5RAP3Q96JB5 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CDK5RAP3Q96JB5 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 SNORD16-201ENST00000362803 99 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 SNORD35A-201ENST00000363389 86 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AL589655.1-201ENST00000405398 482 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AC017078.1-201ENST00000416146 368 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 FAR1P1-201ENST00000427163 934 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AC083862.1-201ENST00000427378 1242 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 RPL17P35-201ENST00000432217 549 ntBASIC7.21□□□□□ -1.26
CDK5RAP3Q96JB5 AL590762.3-201ENST00000436372 640 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms