Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AC068768.2-201ENST00000602352 343 ntBASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AC137695.1-201ENST00000604126 489 ntBASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AL499605.1-201ENST00000604628 403 ntBASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AC003992.1-201ENST00000635364 557 ntBASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 AOX3P-204ENST00000491025 2107 ntBASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
ECHDC3Q96DC8 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 WBP11P1-201ENST00000562560 1931 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 IFIT1P1-201ENST00000400497 1449 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AL512593.1-201ENST00000444758 779 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 RBMY2AP-201ENST00000445405 1157 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 RBMY2CP-201ENST00000448575 1157 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 RBMY2DP-202ENST00000448881 1157 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 RBMY2BP-202ENST00000451071 1156 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AC002075.1-201ENST00000457396 676 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AC009963.3-201ENST00000458090 486 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AP002884.1-201ENST00000479691 655 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 OR4A40P-201ENST00000533878 948 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 OR4H6P-201ENST00000563771 921 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AC141002.1-201ENST00000607025 279 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AC092266.1-201ENST00000610958 165 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AC009779.8-201ENST00000641684 4384 ntBASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ECHDC3Q96DC8 AL354854.1-201ENST00000455940 1363 ntBASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 AC022034.1-201ENST00000512867 2156 ntBASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 OR56A4-201ENST00000330728 1209 ntBASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 AP003170.5-201ENST00000397185 335 ntBASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 RNA5SP156-201ENST00000410250 110 ntBASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 MRPS21P3-201ENST00000436696 262 ntBASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 AL353662.1-201ENST00000439099 327 ntBASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 SEPT14P12-201ENST00000442280 560 ntBASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.18□□□□□ -1.42
ECHDC3Q96DC8 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms