Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CTR9Q6PD62 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.46□□□□□ -1.21
CTR9Q6PD62 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.46□□□□□ -1.22
CTR9Q6PD62 AC006213.6-201ENST00000623722 4179 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CTR9Q6PD62 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.46□□□□□ -1.22
CTR9Q6PD62 OR7E156P-201ENST00000400303 464 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 RPL34P27-201ENST00000428810 349 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 PSMD10P2-201ENST00000432890 672 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 AC092967.1-201ENST00000449016 481 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 Z83838.1-202ENST00000456225 839 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 SNX18P26-201ENST00000458433 740 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 AP002884.1-201ENST00000479691 655 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.46□□□□□ -1.22
CTR9Q6PD62 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.46□□□□□ -1.22
CTR9Q6PD62 RN7SKP35-201ENST00000517210 151 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 IGKV2-19-201ENST00000518132 283 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 AP001858.2-201ENST00000536213 601 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.46□□□□□ -1.22
CTR9Q6PD62 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.46□□□□□ -1.22
CTR9Q6PD62 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.46□□□□□ -1.22
CTR9Q6PD62 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.46□□□□□ -1.22
CTR9Q6PD62 AC137695.1-201ENST00000604126 489 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 AC091167.5-201ENST00000605689 894 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CTR9Q6PD62 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CTR9Q6PD62 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CTR9Q6PD62 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CTR9Q6PD62 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CTR9Q6PD62 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CTR9Q6PD62 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CTR9Q6PD62 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CTR9Q6PD62 AC068769.1-201ENST00000474767 2426 ntBASIC7.46□□□□□ -1.22
CTR9Q6PD62 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 AC105749.1-201ENST00000631338 2008 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CTR9Q6PD62 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CTR9Q6PD62 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 FAM32BP-201ENST00000344033 333 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 RNU1-49P-201ENST00000363468 159 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 RNA5SP478-201ENST00000364657 115 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 RN7SKP186-201ENST00000365371 303 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 PNKDP1-201ENST00000435914 430 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 OR52I1-201ENST00000450052 1050 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 AP000619.2-201ENST00000546014 969 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CTR9Q6PD62 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 AC090888.3-201ENST00000558917 509 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 AC233702.7-202ENST00000582941 211 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 AC022106.1-201ENST00000612834 766 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 MIR6071-201ENST00000616741 78 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 AL157762.1-201ENST00000619612 415 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 AP001052.1-201ENST00000626421 99 ntBASIC7.45□□□□□ -1.22
CTR9Q6PD62 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CTR9Q6PD62 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CTR9Q6PD62 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CTR9Q6PD62 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
CTR9Q6PD62 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CTR9Q6PD62 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CTR9Q6PD62 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CTR9Q6PD62 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.44□□□□□ -1.22
CTR9Q6PD62 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CTR9Q6PD62 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.44□□□□□ -1.22
CTR9Q6PD62 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CTR9Q6PD62 BIN2P1-201ENST00000504996 1530 ntBASIC7.44□□□□□ -1.22
CTR9Q6PD62 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.44□□□□□ -1.22
CTR9Q6PD62 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.44□□□□□ -1.22
CTR9Q6PD62 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CTR9Q6PD62 STAG3L4-201ENST00000352103 530 ntBASIC7.44□□□□□ -1.22
CTR9Q6PD62 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CTR9Q6PD62 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CTR9Q6PD62 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.44□□□□□ -1.22
CTR9Q6PD62 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.44□□□□□ -1.22
CTR9Q6PD62 PPIAP10-201ENST00000438675 458 ntBASIC7.44□□□□□ -1.22
CTR9Q6PD62 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.44□□□□□ -1.22
CTR9Q6PD62 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CTR9Q6PD62 VPS25P1-201ENST00000455691 508 ntBASIC7.44□□□□□ -1.22
CTR9Q6PD62 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.44□□□□□ -1.22
CTR9Q6PD62 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.44□□□□□ -1.22
CTR9Q6PD62 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms