Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.2□□□□□ -1.42
RPA3P35244 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RPA3P35244 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.2□□□□□ -1.42
RPA3P35244 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.2□□□□□ -1.42
RPA3P35244 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.2□□□□□ -1.42
RPA3P35244 AC012368.3-201ENST00000604190 219 ntBASIC6.2□□□□□ -1.42
RPA3P35244 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.2□□□□□ -1.42
RPA3P35244 MIR7159-201ENST00000620587 66 ntBASIC6.2□□□□□ -1.42
RPA3P35244 AC000095.2-202ENST00000637415 154 ntBASIC6.2□□□□□ -1.42
RPA3P35244 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.2□□□□□ -1.42
RPA3P35244 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.2□□□□□ -1.42
RPA3P35244 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RPA3P35244 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.2□□□□□ -1.42
RPA3P35244 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.2□□□□□ -1.42
RPA3P35244 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.2□□□□□ -1.42
RPA3P35244 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RPA3P35244 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RPA3P35244 AL031123.3-201ENST00000623345 1837 ntBASIC6.2□□□□□ -1.42
RPA3P35244 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.2□□□□□ -1.42
RPA3P35244 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.19□□□□□ -1.42
RPA3P35244 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 PRELID1P1-201ENST00000403549 660 ntBASIC6.19□□□□□ -1.42
RPA3P35244 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.19□□□□□ -1.42
RPA3P35244 RN7SKP146-201ENST00000410242 334 ntBASIC6.19□□□□□ -1.42
RPA3P35244 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.19□□□□□ -1.42
RPA3P35244 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.19□□□□□ -1.42
RPA3P35244 RPS3AP38-201ENST00000435889 763 ntBASIC6.19□□□□□ -1.42
RPA3P35244 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.19□□□□□ -1.42
RPA3P35244 COX4I1P2-201ENST00000447446 547 ntBASIC6.19□□□□□ -1.42
RPA3P35244 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.19□□□□□ -1.42
RPA3P35244 SETP4-201ENST00000455717 868 ntBASIC6.19□□□□□ -1.42
RPA3P35244 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 RANP2-201ENST00000456833 229 ntBASIC6.19□□□□□ -1.42
RPA3P35244 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.19□□□□□ -1.42
RPA3P35244 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.19□□□□□ -1.42
RPA3P35244 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.19□□□□□ -1.42
RPA3P35244 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 BTG1P1-201ENST00000540396 508 ntBASIC6.19□□□□□ -1.42
RPA3P35244 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 AC009729.1-201ENST00000548873 1133 ntBASIC6.19□□□□□ -1.42
RPA3P35244 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.19□□□□□ -1.42
RPA3P35244 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.19□□□□□ -1.42
RPA3P35244 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.19□□□□□ -1.42
RPA3P35244 AP001357.1-201ENST00000586304 1053 ntBASIC6.19□□□□□ -1.42
RPA3P35244 AL589765.6-201ENST00000601909 549 ntBASIC6.19□□□□□ -1.42
RPA3P35244 NDUFB9P1-201ENST00000604683 510 ntBASIC6.19□□□□□ -1.42
RPA3P35244 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.19□□□□□ -1.42
RPA3P35244 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.19□□□□□ -1.42
RPA3P35244 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.19□□□□□ -1.42
RPA3P35244 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 WDR95P-201ENST00000425638 1542 ntBASIC6.19□□□□□ -1.42
RPA3P35244 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.19□□□□□ -1.42
RPA3P35244 ZNF969P-201ENST00000510345 2341 ntBASIC6.19□□□□□ -1.42
RPA3P35244 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPA3P35244 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.18□□□□□ -1.42
RPA3P35244 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RPA3P35244 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.18□□□□□ -1.42
RPA3P35244 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPA3P35244 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.18□□□□□ -1.42
RPA3P35244 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RPA3P35244 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPA3P35244 AC140134.1-201ENST00000511830 3544 ntBASIC6.18□□□□□ -1.42
RPA3P35244 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RPA3P35244 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.18□□□□□ -1.42
RPA3P35244 AC003045.1-201ENST00000398779 713 ntBASIC6.18□□□□□ -1.42
RPA3P35244 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.18□□□□□ -1.42
RPA3P35244 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.18□□□□□ -1.42
RPA3P35244 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPA3P35244 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.18□□□□□ -1.42
RPA3P35244 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.18□□□□□ -1.42
RPA3P35244 MRPS21P3-201ENST00000436696 262 ntBASIC6.18□□□□□ -1.42
RPA3P35244 RN7SL714P-201ENST00000487050 298 ntBASIC6.18□□□□□ -1.42
RPA3P35244 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.18□□□□□ -1.42
RPA3P35244 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.18□□□□□ -1.42
RPA3P35244 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.18□□□□□ -1.42
RPA3P35244 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.18□□□□□ -1.42
RPA3P35244 CYCSP25-201ENST00000525280 316 ntBASIC6.18□□□□□ -1.42
RPA3P35244 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms