Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HOXA9P31269 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA9P31269 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA9P31269 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXA9P31269 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
HOXA9P31269 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXA9P31269 AL359976.1-201ENST00000418655 3528 ntBASIC6.51□□□□□ -1.37
HOXA9P31269 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA9P31269 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXA9P31269 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HOXA9P31269 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA9P31269 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXA9P31269 AC105235.1-201ENST00000623208 1816 ntBASIC6.51□□□□□ -1.37
HOXA9P31269 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA9P31269 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
HOXA9P31269 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA9P31269 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA9P31269 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA9P31269 RNFT1P3-201ENST00000340898 1052 ntBASIC6.51□□□□□ -1.37
HOXA9P31269 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA9P31269 RNA5SP178-201ENST00000410380 128 ntBASIC6.51□□□□□ -1.37
HOXA9P31269 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.51□□□□□ -1.37
HOXA9P31269 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXA9P31269 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXA9P31269 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.51□□□□□ -1.37
HOXA9P31269 RANP2-201ENST00000456833 229 ntBASIC6.51□□□□□ -1.37
HOXA9P31269 SNX18P26-201ENST00000458433 740 ntBASIC6.51□□□□□ -1.37
HOXA9P31269 RN7SL273P-201ENST00000481561 299 ntBASIC6.51□□□□□ -1.37
HOXA9P31269 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXA9P31269 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.51□□□□□ -1.37
HOXA9P31269 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXA9P31269 Y_RNA.710-201ENST00000516975 110 ntBASIC6.51□□□□□ -1.37
HOXA9P31269 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HOXA9P31269 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.51□□□□□ -1.37
HOXA9P31269 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXA9P31269 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.51□□□□□ -1.37
HOXA9P31269 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXA9P31269 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HOXA9P31269 AC097467.4-201ENST00000605504 141 ntBASIC6.51□□□□□ -1.37
HOXA9P31269 MIR6886-201ENST00000619864 61 ntBASIC6.51□□□□□ -1.37
HOXA9P31269 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXA9P31269 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA9P31269 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXA9P31269 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXA9P31269 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA9P31269 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXA9P31269 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA9P31269 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA9P31269 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA9P31269 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
HOXA9P31269 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
HOXA9P31269 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA9P31269 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HOXA9P31269 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HOXA9P31269 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA9P31269 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA9P31269 FO082842.1-201ENST00000423552 1370 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA9P31269 SNORA51.1-201ENST00000363243 140 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXA9P31269 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HOXA9P31269 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXA9P31269 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.5□□□□□ -1.37
HOXA9P31269 BX284632.2-201ENST00000421091 399 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA9P31269 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXA9P31269 VN1R110P-201ENST00000438988 971 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA9P31269 FTLP8-201ENST00000446770 267 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA9P31269 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.5□□□□□ -1.37
HOXA9P31269 RN7SL193P-201ENST00000491708 276 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 AC253576.1-201ENST00000511645 1156 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXA9P31269 AP000648.1-201ENST00000529682 397 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.5□□□□□ -1.37
HOXA9P31269 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.5□□□□□ -1.37
HOXA9P31269 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.5□□□□□ -1.37
HOXA9P31269 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXA9P31269 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.5□□□□□ -1.37
HOXA9P31269 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.5□□□□□ -1.37
HOXA9P31269 AP005119.1-201ENST00000580956 292 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 AC005244.1-201ENST00000582566 339 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 PRELID3BP3-201ENST00000584963 545 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
HOXA9P31269 AL031601.1-201ENST00000605702 394 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXA9P31269 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
HOXA9P31269 AC063952.1-203ENST00000634410 658 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HOXA9P31269 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXA9P31269 AC022905.1-201ENST00000503430 3048 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXA9P31269 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA9P31269 AC010329.1-201ENST00000593903 8328 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXA9P31269 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA9P31269 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA9P31269 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXA9P31269 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms