Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL445238.1-204ENST00000400311 463 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.23□□□□□ -1.57
COL8A2P25067 UBE2V1P14-201ENST00000415815 558 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.23□□□□□ -1.57
COL8A2P25067 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.23□□□□□ -1.57
COL8A2P25067 AL451136.1-201ENST00000435399 325 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.23□□□□□ -1.57
COL8A2P25067 AC002553.3-201ENST00000453002 341 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 PPIAP27-201ENST00000453800 265 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 SNX18P26-201ENST00000458433 740 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 LSM3P4-201ENST00000502948 309 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 AL158068.1-201ENST00000506116 616 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.23□□□□□ -1.57
COL8A2P25067 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.23□□□□□ -1.57
COL8A2P25067 AC090958.1-201ENST00000511122 351 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.23□□□□□ -1.57
COL8A2P25067 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.23□□□□□ -1.57
COL8A2P25067 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.23□□□□□ -1.57
COL8A2P25067 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.23□□□□□ -1.57
COL8A2P25067 AP004607.6-201ENST00000525033 1202 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.23□□□□□ -1.57
COL8A2P25067 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.23□□□□□ -1.57
COL8A2P25067 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.23□□□□□ -1.57
COL8A2P25067 AC092865.1-201ENST00000544395 1023 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.23□□□□□ -1.57
COL8A2P25067 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.23□□□□□ -1.57
COL8A2P25067 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.23□□□□□ -1.57
COL8A2P25067 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.23□□□□□ -1.57
COL8A2P25067 AC011497.2-201ENST00000600255 639 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 AL365181.4-201ENST00000609800 547 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 AC004801.6-201ENST00000616571 978 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.23□□□□□ -1.57
COL8A2P25067 AC012254.5-201ENST00000623573 478 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.23□□□□□ -1.57
COL8A2P25067 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL8A2P25067 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL8A2P25067 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL8A2P25067 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.23□□□□□ -1.57
COL8A2P25067 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL8A2P25067 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.23□□□□□ -1.57
COL8A2P25067 BIN2P1-201ENST00000504996 1530 ntBASIC5.23□□□□□ -1.57
COL8A2P25067 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.23□□□□□ -1.57
COL8A2P25067 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.23□□□□□ -1.57
COL8A2P25067 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL8A2P25067 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.22□□□□□ -1.57
COL8A2P25067 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL8A2P25067 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.22□□□□□ -1.57
COL8A2P25067 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL8A2P25067 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL8A2P25067 MIR433-201ENST00000384837 93 ntBASIC5.22□□□□□ -1.57
COL8A2P25067 RNA5SP156-201ENST00000410250 110 ntBASIC5.22□□□□□ -1.57
COL8A2P25067 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.22□□□□□ -1.57
COL8A2P25067 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.22□□□□□ -1.57
COL8A2P25067 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL8A2P25067 AC130360.1-201ENST00000425489 1117 ntBASIC5.22□□□□□ -1.57
COL8A2P25067 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL8A2P25067 GAPDHP23-201ENST00000444823 993 ntBASIC5.22□□□□□ -1.57
COL8A2P25067 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.22□□□□□ -1.57
COL8A2P25067 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.22□□□□□ -1.57
COL8A2P25067 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.22□□□□□ -1.57
COL8A2P25067 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.22□□□□□ -1.57
COL8A2P25067 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.22□□□□□ -1.57
COL8A2P25067 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.22□□□□□ -1.57
COL8A2P25067 CR383658.1-201ENST00000514609 734 ntBASIC5.22□□□□□ -1.57
COL8A2P25067 RN7SKP238-201ENST00000516483 249 ntBASIC5.22□□□□□ -1.57
COL8A2P25067 AC130365.2-201ENST00000525882 1201 ntBASIC5.22□□□□□ -1.57
COL8A2P25067 AC021269.1-201ENST00000526860 705 ntBASIC5.22□□□□□ -1.57
COL8A2P25067 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.22□□□□□ -1.57
COL8A2P25067 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.22□□□□□ -1.57
COL8A2P25067 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.22□□□□□ -1.57
COL8A2P25067 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.22□□□□□ -1.57
COL8A2P25067 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.22□□□□□ -1.57
COL8A2P25067 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.22□□□□□ -1.57
COL8A2P25067 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.22□□□□□ -1.57
COL8A2P25067 AC067773.1-201ENST00000603284 1094 ntBASIC5.22□□□□□ -1.57
COL8A2P25067 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.22□□□□□ -1.57
COL8A2P25067 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.22□□□□□ -1.57
COL8A2P25067 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL8A2P25067 AC007114.2-201ENST00000576014 4281 ntBASIC5.22□□□□□ -1.57
COL8A2P25067 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.22□□□□□ -1.57
COL8A2P25067 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.22□□□□□ -1.57
COL8A2P25067 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.22□□□□□ -1.57
COL8A2P25067 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL8A2P25067 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.22□□□□□ -1.57
COL8A2P25067 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.22□□□□□ -1.57
COL8A2P25067 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL8A2P25067 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL8A2P25067 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL8A2P25067 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL8A2P25067 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.22□□□□□ -1.57
COL8A2P25067 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL8A2P25067 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.21□□□□□ -1.57
COL8A2P25067 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL8A2P25067 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.21□□□□□ -1.58
COL8A2P25067 AC022325.1-201ENST00000502748 2199 ntBASIC5.21□□□□□ -1.58
COL8A2P25067 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.21□□□□□ -1.58
COL8A2P25067 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL8A2P25067 AC127024.8-201ENST00000623719 2094 ntBASIC5.21□□□□□ -1.58
COL8A2P25067 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms