Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.18□□□□□ -1.42
LDLRP01130 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LDLRP01130 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.18□□□□□ -1.42
LDLRP01130 AL731532.1-201ENST00000623972 4236 ntBASIC6.18□□□□□ -1.42
LDLRP01130 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LDLRP01130 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LDLRP01130 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
LDLRP01130 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LDLRP01130 MIPEPP2-201ENST00000422560 1819 ntBASIC6.18□□□□□ -1.42
LDLRP01130 AC105235.1-201ENST00000623208 1816 ntBASIC6.18□□□□□ -1.42
LDLRP01130 AC007342.9-201ENST00000623877 1385 ntBASIC6.18□□□□□ -1.42
LDLRP01130 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
LDLRP01130 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.17□□□□□ -1.42
LDLRP01130 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 AC110373.1-201ENST00000505994 3505 ntBASIC6.17□□□□□ -1.42
LDLRP01130 AC099654.3-201ENST00000447087 1546 ntBASIC6.17□□□□□ -1.42
LDLRP01130 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
LDLRP01130 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
LDLRP01130 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.17□□□□□ -1.42
LDLRP01130 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.17□□□□□ -1.42
LDLRP01130 PAICSP2-201ENST00000429118 1150 ntBASIC6.17□□□□□ -1.42
LDLRP01130 UBE2V2P3-201ENST00000433562 437 ntBASIC6.17□□□□□ -1.42
LDLRP01130 DNAJC19P5-201ENST00000443295 316 ntBASIC6.17□□□□□ -1.42
LDLRP01130 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.17□□□□□ -1.42
LDLRP01130 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.17□□□□□ -1.42
LDLRP01130 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.17□□□□□ -1.42
LDLRP01130 AP000926.3-201ENST00000497201 299 ntBASIC6.17□□□□□ -1.42
LDLRP01130 HMGN1P16-201ENST00000508308 283 ntBASIC6.17□□□□□ -1.42
LDLRP01130 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.17□□□□□ -1.42
LDLRP01130 IGLVIV-64-201ENST00000518581 301 ntBASIC6.17□□□□□ -1.42
LDLRP01130 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.17□□□□□ -1.42
LDLRP01130 AC009879.1-201ENST00000520029 839 ntBASIC6.17□□□□□ -1.42
LDLRP01130 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.17□□□□□ -1.42
LDLRP01130 AP003080.1-202ENST00000526526 915 ntBASIC6.17□□□□□ -1.42
LDLRP01130 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.17□□□□□ -1.42
LDLRP01130 SETP17-201ENST00000534163 817 ntBASIC6.17□□□□□ -1.42
LDLRP01130 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.17□□□□□ -1.42
LDLRP01130 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.17□□□□□ -1.42
LDLRP01130 AC063977.7-201ENST00000594454 337 ntBASIC6.17□□□□□ -1.42
LDLRP01130 AL365181.4-201ENST00000609800 547 ntBASIC6.17□□□□□ -1.42
LDLRP01130 AC020658.4-201ENST00000613987 684 ntBASIC6.17□□□□□ -1.42
LDLRP01130 uc_338.31-201ENST00000615595 186 ntBASIC6.17□□□□□ -1.42
LDLRP01130 U1.41-201ENST00000617626 165 ntBASIC6.17□□□□□ -1.42
LDLRP01130 SNORA16A-202ENST00000628458 135 ntBASIC6.17□□□□□ -1.42
LDLRP01130 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.17□□□□□ -1.42
LDLRP01130 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.17□□□□□ -1.42
LDLRP01130 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.17□□□□□ -1.42
LDLRP01130 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LDLRP01130 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.17□□□□□ -1.42
LDLRP01130 AL353763.1-201ENST00000624467 1628 ntBASIC6.17□□□□□ -1.42
LDLRP01130 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 LINC01613-201ENST00000561476 2780 ntBASIC6.17□□□□□ -1.42
LDLRP01130 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.17□□□□□ -1.42
LDLRP01130 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LDLRP01130 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LDLRP01130 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
LDLRP01130 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LDLRP01130 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
LDLRP01130 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LDLRP01130 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
LDLRP01130 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
LDLRP01130 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LDLRP01130 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.16□□□□□ -1.42
LDLRP01130 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LDLRP01130 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LDLRP01130 SNORA38B-201ENST00000363524 131 ntBASIC6.16□□□□□ -1.42
LDLRP01130 RN7SKP78-201ENST00000364711 318 ntBASIC6.16□□□□□ -1.42
LDLRP01130 RNU1-59P-201ENST00000364829 162 ntBASIC6.16□□□□□ -1.42
LDLRP01130 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
LDLRP01130 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
LDLRP01130 RBBP4P5-201ENST00000398583 1266 ntBASIC6.16□□□□□ -1.42
LDLRP01130 PSMA6P1-201ENST00000400275 741 ntBASIC6.16□□□□□ -1.42
LDLRP01130 PRELID1P1-201ENST00000403549 660 ntBASIC6.16□□□□□ -1.42
LDLRP01130 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.16□□□□□ -1.42
LDLRP01130 RN7SKP129-201ENST00000410288 299 ntBASIC6.16□□□□□ -1.42
LDLRP01130 AC007679.3-201ENST00000434035 414 ntBASIC6.16□□□□□ -1.42
LDLRP01130 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.16□□□□□ -1.42
LDLRP01130 AC002075.1-201ENST00000457396 676 ntBASIC6.16□□□□□ -1.42
LDLRP01130 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.16□□□□□ -1.42
LDLRP01130 AC099340.1-201ENST00000475247 599 ntBASIC6.16□□□□□ -1.42
LDLRP01130 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.16□□□□□ -1.42
LDLRP01130 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.16□□□□□ -1.42
LDLRP01130 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.16□□□□□ -1.42
LDLRP01130 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.16□□□□□ -1.42
LDLRP01130 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.16□□□□□ -1.42
LDLRP01130 AC124891.1-201ENST00000536322 519 ntBASIC6.16□□□□□ -1.42
LDLRP01130 AC005519.1-201ENST00000554490 601 ntBASIC6.16□□□□□ -1.42
LDLRP01130 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LDLRP01130 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms