Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL683826.1-201ENST00000624104 627 ntBASIC5.73□□□□□ -1.49
ZIC3O60481 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.73□□□□□ -1.49
ZIC3O60481 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
ZIC3O60481 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.73□□□□□ -1.49
ZIC3O60481 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ZIC3O60481 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.73□□□□□ -1.49
ZIC3O60481 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.73□□□□□ -1.49
ZIC3O60481 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ZIC3O60481 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
ZIC3O60481 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ZIC3O60481 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.73□□□□□ -1.49
ZIC3O60481 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ZIC3O60481 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ZIC3O60481 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
ZIC3O60481 ZNF812P-201ENST00000457674 1694 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 AL359976.1-201ENST00000418655 3528 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.72□□□□□ -1.49
ZIC3O60481 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.72□□□□□ -1.49
ZIC3O60481 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.72□□□□□ -1.49
ZIC3O60481 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
ZIC3O60481 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.72□□□□□ -1.49
ZIC3O60481 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
ZIC3O60481 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 RNA5SP232-201ENST00000364144 119 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 RNA5SP478-201ENST00000364657 115 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 MIR1275-201ENST00000408770 80 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 AL035422.1-201ENST00000414193 397 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 RPL24P2-201ENST00000421023 475 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 RPS7P14-201ENST00000426405 583 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.72□□□□□ -1.49
ZIC3O60481 AC108479.1-201ENST00000431142 427 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 RPL17P35-201ENST00000432217 549 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 SUMO2P8-201ENST00000434672 286 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 RN7SL168P-201ENST00000463821 279 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 AC104339.1-201ENST00000465478 348 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.72□□□□□ -1.49
ZIC3O60481 RN7SL326P-201ENST00000477493 296 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 AC068522.1-201ENST00000482895 345 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 OR4D12P-201ENST00000509361 911 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 AC010343.2-201ENST00000510162 224 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 AC112206.4-201ENST00000515142 405 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 RNA5SP473-201ENST00000516402 125 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 SNORA26.10-201ENST00000516427 141 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 Vault.2-201ENST00000516519 98 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 RNA5SP441-201ENST00000516809 88 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.72□□□□□ -1.49
ZIC3O60481 OR10D4P-201ENST00000525892 951 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.72□□□□□ -1.49
ZIC3O60481 AC092451.2-201ENST00000538746 658 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.72□□□□□ -1.49
ZIC3O60481 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
ZIC3O60481 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 MRPS21P9-201ENST00000571150 257 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.72□□□□□ -1.49
ZIC3O60481 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.72□□□□□ -1.49
ZIC3O60481 SMIM12P1-201ENST00000603004 274 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 AL445649.1-201ENST00000615941 691 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 AC253576.2-201ENST00000618815 580 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 AL591926.1-201ENST00000620542 217 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 MIR6806-201ENST00000622141 64 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 CASC19-274ENST00000642018 970 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 MAPK10-287ENST00000641217 3037 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.72□□□□□ -1.49
ZIC3O60481 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.72□□□□□ -1.49
ZIC3O60481 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
ZIC3O60481 AC107980.1-201ENST00000558671 3355 ntBASIC5.72□□□□□ -1.49
ZIC3O60481 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.72□□□□□ -1.49
ZIC3O60481 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ZIC3O60481 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
ZIC3O60481 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
ZIC3O60481 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
ZIC3O60481 OLMALINC-203ENST00000641087 3779 ntBASIC5.71□□□□□ -1.49
ZIC3O60481 AC241584.2-201ENST00000637142 2090 ntBASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms