Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCDC188H7C350 SNX18P24-201ENST00000505249 671 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC188H7C350 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
CCDC188H7C350 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC188H7C350 GTF2IP11-201ENST00000526931 420 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 AP001858.2-201ENST00000536213 601 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 AC092865.1-201ENST00000544395 1023 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC188H7C350 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC188H7C350 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC188H7C350 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC188H7C350 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
CCDC188H7C350 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC188H7C350 FCGR1CP-201ENST00000579737 1127 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 AC005224.3-201ENST00000584683 2140 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 RPL7AP69-201ENST00000595306 806 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC188H7C350 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC188H7C350 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.39□□□□□ -1.39
CCDC188H7C350 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC188H7C350 AC027575.3-201ENST00000583058 2747 ntBASIC6.39□□□□□ -1.39
CCDC188H7C350 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC188H7C350 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC188H7C350 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC188H7C350 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC188H7C350 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC188H7C350 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC188H7C350 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC188H7C350 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC188H7C350 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CCDC188H7C350 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC188H7C350 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC188H7C350 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC188H7C350 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC188H7C350 AC245096.1-201ENST00000413104 546 ntBASIC6.38□□□□□ -1.39
CCDC188H7C350 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC188H7C350 AC013268.2-201ENST00000420753 337 ntBASIC6.38□□□□□ -1.39
CCDC188H7C350 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 AL592114.2-201ENST00000440142 532 ntBASIC6.38□□□□□ -1.39
CCDC188H7C350 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC188H7C350 CUBNP2-201ENST00000443534 1139 ntBASIC6.38□□□□□ -1.39
CCDC188H7C350 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC188H7C350 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.38□□□□□ -1.39
CCDC188H7C350 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC188H7C350 LDHAP1-201ENST00000509421 992 ntBASIC6.38□□□□□ -1.39
CCDC188H7C350 AC093816.1-201ENST00000515076 913 ntBASIC6.38□□□□□ -1.39
CCDC188H7C350 AC096661.1-201ENST00000515870 822 ntBASIC6.38□□□□□ -1.39
CCDC188H7C350 IGKV1D-32-201ENST00000517449 318 ntBASIC6.38□□□□□ -1.39
CCDC188H7C350 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC188H7C350 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC188H7C350 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 AC139792.1-201ENST00000607051 647 ntBASIC6.38□□□□□ -1.39
CCDC188H7C350 AL136097.3-201ENST00000611097 505 ntBASIC6.38□□□□□ -1.39
CCDC188H7C350 MIR6731-201ENST00000614863 72 ntBASIC6.38□□□□□ -1.39
CCDC188H7C350 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CCDC188H7C350 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC188H7C350 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC188H7C350 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC188H7C350 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
CCDC188H7C350 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC188H7C350 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC188H7C350 OFD1P17-201ENST00000437639 3018 ntBASIC6.38□□□□□ -1.39
CCDC188H7C350 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC188H7C350 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC188H7C350 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CCDC188H7C350 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC188H7C350 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC188H7C350 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
CCDC188H7C350 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC188H7C350 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CCDC188H7C350 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CCDC188H7C350 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CCDC188H7C350 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC188H7C350 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC188H7C350 SAMMSON-210ENST00000641260 1308 ntBASIC6.37□□□□□ -1.39
CCDC188H7C350 AC010894.1-201ENST00000313760 361 ntBASIC6.37□□□□□ -1.39
CCDC188H7C350 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC188H7C350 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC188H7C350 RNU1-5P-201ENST00000362684 144 ntBASIC6.37□□□□□ -1.39
CCDC188H7C350 RNU1-49P-201ENST00000363468 159 ntBASIC6.37□□□□□ -1.39
CCDC188H7C350 RNA5SP302-201ENST00000364896 100 ntBASIC6.37□□□□□ -1.39
CCDC188H7C350 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CCDC188H7C350 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CCDC188H7C350 RN7SKP121-201ENST00000410842 305 ntBASIC6.37□□□□□ -1.39
CCDC188H7C350 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms