Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA3F8WFD2 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 SAGE3P-201ENST00000619800 1635 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 RN7SKP240-201ENST00000410583 375 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AL035422.1-201ENST00000414193 397 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 DHFRP2-201ENST00000414224 547 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 NME1P1-201ENST00000420914 382 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 MED28P4-201ENST00000433137 572 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AC110602.1-201ENST00000437414 318 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AMYP1-201ENST00000440059 1023 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AC023818.1-201ENST00000498379 384 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 MTND6P8-201ENST00000503471 522 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 SNX18P24-201ENST00000505249 671 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 IGHV1-14-201ENST00000523391 241 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 TPRX1P1-201ENST00000557620 319 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AC002519.2-203ENST00000567043 837 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AC067852.5-201ENST00000589299 310 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AC124916.2-201ENST00000604416 224 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AC073046.2-201ENST00000604756 527 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AL359742.1-201ENST00000622497 540 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 AC009120.7-201ENST00000623452 780 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 CASC19-255ENST00000641733 1385 ntBASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA3F8WFD2 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AKAP17BP-201ENST00000431706 2719 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 RPL36P18-201ENST00000419316 318 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AL354707.3-201ENST00000427308 331 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AL451136.1-201ENST00000435399 325 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 RPL5P7-201ENST00000444235 813 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 HMGN1P2-201ENST00000445197 310 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AC010240.2-201ENST00000445363 1205 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 RNU7-157P-201ENST00000459600 66 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 SNORD116-30-201ENST00000516468 85 ntBASIC5.78□□□□□ -1.48
NPIPA3F8WFD2 RNA5SP206-201ENST00000516703 121 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 320.5 ms