Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC090607.2-201ENST00000560331 695 ntBASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 MIR4793-201ENST00000577502 87 ntBASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 RN7SL376P-201ENST00000578594 264 ntBASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 BPTFP1-201ENST00000579209 492 ntBASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 AL161729.2-201ENST00000605700 456 ntBASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 PFN1P2-202ENST00000621347 397 ntBASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 AC018558.4-201ENST00000622153 281 ntBASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 AL589666.2-201ENST00000624603 618 ntBASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 MIR3120-201ENST00000636555 81 ntBASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
PCDHB11Q9Y5F2 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC114786.2-201ENST00000510090 1426 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 Y_RNA.453-201ENST00000384223 109 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 SNORD3J-201ENST00000408473 190 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AL049758.1-201ENST00000423154 397 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 RPL5P6-201ENST00000425640 886 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 DSTNP5-201ENST00000427921 523 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AL136231.1-201ENST00000429407 730 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 MTCO1P54-201ENST00000430139 712 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC242426.1-201ENST00000435270 960 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 HMGN1P32-201ENST00000441744 256 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 GDI2P2-201ENST00000445131 608 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC005840.2-201ENST00000447193 355 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 RBMY3AP-201ENST00000449381 1145 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 BZW1P1-201ENST00000454901 1240 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC079841.1-201ENST00000481228 950 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 RPS4XP15-201ENST00000489210 795 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC122718.2-201ENST00000505325 591 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 NACAP5-201ENST00000509863 636 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC091982.1-201ENST00000518134 520 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC087808.1-201ENST00000520501 361 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 EIF4A1P9-201ENST00000576035 1207 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 MIR4682-201ENST00000580643 80 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 NDUFA3P1-201ENST00000588007 252 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.88□□□□□ -1.15
PCDHB11Q9Y5F2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms