Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 SMCO2-201ENST00000298876 1122 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 Y_RNA.187-201ENST00000363918 113 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 Y_RNA.489-201ENST00000384410 101 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AL138807.1-201ENST00000400354 459 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC009319.1-201ENST00000411493 754 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AL354890.1-201ENST00000413730 346 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 OR2L6P-201ENST00000416377 940 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 SMCO2-202ENST00000416383 1272 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC083875.1-201ENST00000419509 405 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 RPS27AP6-201ENST00000427962 448 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 SKP1P3-201ENST00000429280 487 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 ATP5JP1-201ENST00000431631 322 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC027124.1-201ENST00000440852 466 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 RPL23AP16-201ENST00000441715 421 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 LINC01713-201ENST00000445589 932 ntTSL 3 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC068781.1-201ENST00000488231 618 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 TDGF1P3-201ENST00000493351 567 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC008429.4-201ENST00000521201 182 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AP003532.1-201ENST00000529936 310 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC138466.2-201ENST00000540993 304 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC004828.1-201ENST00000555303 654 ntTSL 3 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 PABPN1-208ENST00000557702 778 ntTSL 2 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC126323.1-201ENST00000561706 611 ntTSL 3 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 LINC02191-201ENST00000568036 518 ntTSL 4 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 RN7SL474P-201ENST00000583485 301 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC090213.1-201ENST00000586841 546 ntTSL 4 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC005580.1-202ENST00000587140 562 ntTSL 5 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 HMGN1P30-201ENST00000589286 268 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC136475.8-201ENST00000602809 386 ntTSL 5 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AL713866.2-201ENST00000603579 219 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 SRGAP2D-201ENST00000605551 1021 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AL031281.2-201ENST00000606754 748 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 FAM238B-204ENST00000612040 423 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AL356481.2-201ENST00000629902 528 ntTSL 3 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AL449283.1-201ENST00000602631 3403 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AL451074.2-201ENST00000423121 2150 ntTSL 2 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AP002765.1-201ENST00000528675 1507 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 HMGCLL1-201ENST00000274901 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AC130365.1-201ENST00000530524 1553 ntBASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 KCNH5-204ENST00000420622 2711 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 AP000289.1-201ENST00000421051 1361 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PCDHB13Q9Y5F0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 CASC19-205ENST00000641013 1411 ntBASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 LINC00703-202ENST00000454152 2390 ntTSL 2 BASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 RPL32-201ENST00000273223 567 ntTSL 3 BASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 IDSP1-201ENST00000324799 376 ntBASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 SNORD3G-201ENST00000362796 215 ntBASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 Y_RNA.112-201ENST00000363250 102 ntBASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 RNU4-31P-201ENST00000384211 141 ntBASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 AC068050.1-201ENST00000394891 380 ntBASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 NPM1P38-201ENST00000403835 865 ntBASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 AL137784.1-201ENST00000407121 745 ntBASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 RNU6-77P-201ENST00000410554 91 ntBASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 DPY19L1P2-201ENST00000426647 915 ntBASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 OR51AB1P-201ENST00000429046 620 ntBASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 RALY-AS1-202ENST00000432859 610 ntTSL 3 BASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 CBX1P1-201ENST00000440184 427 ntBASIC9.74□□□□□ -0.85
PCDHB13Q9Y5F0 YAE1D1-203ENST00000448268 425 ntTSL 2 BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms