Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 MTND4LP17-201ENST00000414607 293 ntBASIC6.33□□□□□ -1.4
SPASTQ9UBP0 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AC115283.1-201ENST00000427353 400 ntBASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AL451136.1-201ENST00000435399 325 ntBASIC6.33□□□□□ -1.4
SPASTQ9UBP0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AL645936.1-201ENST00000441979 518 ntBASIC6.33□□□□□ -1.4
SPASTQ9UBP0 CXCR2P1-202ENST00000443392 1074 ntBASIC6.33□□□□□ -1.4
SPASTQ9UBP0 RPL23AP68-201ENST00000480924 445 ntBASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 HMGN1P17-201ENST00000513734 295 ntBASIC6.33□□□□□ -1.4
SPASTQ9UBP0 RNU6-1334P-201ENST00000516032 105 ntBASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 DYNLL1P1-201ENST00000595442 269 ntBASIC6.33□□□□□ -1.4
SPASTQ9UBP0 RPSAP75-201ENST00000605848 301 ntBASIC6.33□□□□□ -1.4
SPASTQ9UBP0 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 DOCK11P1-201ENST00000553480 5932 ntBASIC6.33□□□□□ -1.4
SPASTQ9UBP0 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SPASTQ9UBP0 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 QRSL1P1-201ENST00000400977 1540 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 FAM32BP-201ENST00000344033 333 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 RNU1-46P-201ENST00000384425 164 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 RN7SKP281-201ENST00000410472 352 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 RN7SKP240-201ENST00000410583 375 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AL035422.1-201ENST00000414193 397 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 DHFRP2-201ENST00000414224 547 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 VN1R3-201ENST00000418822 919 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AC079807.1-201ENST00000429993 481 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 MED28P4-201ENST00000433137 572 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 OR52I1-201ENST00000450052 1050 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AC002075.1-201ENST00000457396 676 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AL078623.1-201ENST00000602702 907 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AC124916.2-201ENST00000604416 224 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AC097467.4-201ENST00000605504 141 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 RN7SL261P-201ENST00000613441 282 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AL357153.4-201ENST00000620487 1016 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AP001885.1-201ENST00000621658 558 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AC104966.1-201ENST00000467010 1464 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AL161901.1-201ENST00000624954 3425 ntBASIC6.32□□□□□ -1.4
SPASTQ9UBP0 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SPASTQ9UBP0 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms