Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC016397.1-201ENST00000412463 242 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 HMGA1P8-201ENST00000414130 321 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 RPL23AP60-201ENST00000450011 454 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 AC105105.5-201ENST00000622635 1294 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 IMMTP1-201ENST00000435590 2219 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 POGK-202ENST00000367876 5754 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 CEACAMP9-201ENST00000442990 513 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 RPS23P9-201ENST00000448848 438 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 AC009220.1-201ENST00000451614 275 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 RN7SL97P-201ENST00000486780 299 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 RPL37AP8-201ENST00000494116 276 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 SNRPCP2-201ENST00000504370 475 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 OR56A7P-201ENST00000524865 941 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 GARSP1-201ENST00000570895 719 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 AC063977.5-201ENST00000601044 974 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 AL359091.1-201ENST00000449048 1734 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 AC007614.5-201ENST00000623424 8892 ntBASIC6.16□□□□□ -1.42
CHD7Q9P2D1 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CHD7Q9P2D1 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AL663074.2-201ENST00000440621 479 ntBASIC6.15□□□□□ -1.42
CHD7Q9P2D1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 RPS29P33-201ENST00000456717 146 ntBASIC6.15□□□□□ -1.42
CHD7Q9P2D1 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 RPL7P6-201ENST00000480903 738 ntBASIC6.15□□□□□ -1.42
CHD7Q9P2D1 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 RNA5SP400-201ENST00000517155 111 ntBASIC6.15□□□□□ -1.42
CHD7Q9P2D1 OR4A40P-201ENST00000533878 948 ntBASIC6.15□□□□□ -1.42
CHD7Q9P2D1 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AL390318.1-201ENST00000624564 687 ntBASIC6.15□□□□□ -1.42
CHD7Q9P2D1 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AL133173.1-201ENST00000423458 397 ntBASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 RPL7L1P9-201ENST00000431298 745 ntBASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AC006335.2-201ENST00000437993 330 ntBASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 RPL32P33-201ENST00000487023 394 ntBASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AC074050.1-201ENST00000563247 211 ntBASIC6.15□□□□□ -1.42
CHD7Q9P2D1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.15□□□□□ -1.42
CHD7Q9P2D1 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 OR5M2P-202ENST00000641241 4242 ntBASIC6.15□□□□□ -1.43
CHD7Q9P2D1 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.15□□□□□ -1.43
CHD7Q9P2D1 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms