Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC090568.1-201ENST00000509499 856 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 SNX18P25-201ENST00000510539 758 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 IGKV2-4-201ENST00000523070 340 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC092375.1-201ENST00000550410 637 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 RPAP2P1-201ENST00000603626 1168 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 KATNBL1P5-201ENST00000605015 517 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 SNORA74.4-201ENST00000607595 199 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC097504.2-201ENST00000608088 454 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 AP000943.4-201ENST00000622912 357 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
VTA1Q9NP79 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
VTA1Q9NP79 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
VTA1Q9NP79 AL049634.1-201ENST00000453770 1720 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC010401.2-201ENST00000575137 4934 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
VTA1Q9NP79 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
VTA1Q9NP79 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
VTA1Q9NP79 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
VTA1Q9NP79 DDX6P1-205ENST00000441966 1436 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VTA1Q9NP79 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VTA1Q9NP79 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VTA1Q9NP79 AC023245.2-201ENST00000530760 2978 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.33□□□□□ -1.24
VTA1Q9NP79 AC119674.1-204ENST00000641348 1343 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.33□□□□□ -1.24
VTA1Q9NP79 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
VTA1Q9NP79 RN7SKP275-201ENST00000364626 301 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 RN7SKP269-201ENST00000365545 319 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.33□□□□□ -1.24
VTA1Q9NP79 AL355143.1-201ENST00000407101 841 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.33□□□□□ -1.24
VTA1Q9NP79 RPL7AP14-201ENST00000424041 802 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 AL354707.3-201ENST00000427308 331 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 MED28P4-201ENST00000433137 572 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 CXCR2P1-202ENST00000443392 1074 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.33□□□□□ -1.24
VTA1Q9NP79 AC108751.3-201ENST00000461814 1020 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 OR51A1P-201ENST00000511110 946 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 IGLVIV-66-1-201ENST00000521832 460 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC7.33□□□□□ -1.24
VTA1Q9NP79 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.33□□□□□ -1.24
VTA1Q9NP79 MTND1P8-201ENST00000571424 950 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 GLYATL1P2-202ENST00000588046 902 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 AC135178.6-201ENST00000605314 398 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 RPSAP75-201ENST00000605848 301 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 AC015982.1-201ENST00000608113 465 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 AL445493.3-201ENST00000619568 477 ntBASIC7.33□□□□□ -1.24
VTA1Q9NP79 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.33□□□□□ -1.24
VTA1Q9NP79 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
VTA1Q9NP79 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
VTA1Q9NP79 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.33□□□□□ -1.24
VTA1Q9NP79 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
VTA1Q9NP79 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
VTA1Q9NP79 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
VTA1Q9NP79 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.33□□□□□ -1.24
VTA1Q9NP79 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.33□□□□□ -1.24
VTA1Q9NP79 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
VTA1Q9NP79 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 TRIM60P17-201ENST00000415181 719 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 Z68868.1-201ENST00000429048 544 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 AC110602.1-201ENST00000437414 318 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 FCF1P6-201ENST00000456841 595 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 LDHBP2-201ENST00000456969 1005 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.32□□□□□ -1.24
VTA1Q9NP79 AP002453.1-201ENST00000492327 668 ntBASIC7.32□□□□□ -1.24
VTA1Q9NP79 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms