Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 RPL23AP18-201ENST00000416139 468 ntBASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 EMC3-AS1-205ENST00000438698 534 ntBASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 CXCR2P1-202ENST00000443392 1074 ntBASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 AL590004.3-202ENST00000445883 451 ntBASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 AC044810.1-201ENST00000480271 711 ntBASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 TOMM22P4-201ENST00000511318 336 ntBASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 TDGP1-201ENST00000543961 1229 ntBASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 AC037479.1-201ENST00000558361 625 ntBASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 RN7SL66P-201ENST00000582099 264 ntBASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 CLUHP10-201ENST00000631979 980 ntBASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.65□□□□□ -1.5
RSPO3Q9BXY4 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RSPO3Q9BXY4 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RSPO3Q9BXY4 AC010168.2-201ENST00000562691 5428 ntBASIC5.65□□□□□ -1.51
RSPO3Q9BXY4 AC114876.1-201ENST00000490962 1366 ntBASIC5.65□□□□□ -1.51
RSPO3Q9BXY4 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RSPO3Q9BXY4 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RSPO3Q9BXY4 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
RSPO3Q9BXY4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RSPO3Q9BXY4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 RNA5SP375-201ENST00000362975 119 ntBASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 AL133260.1-201ENST00000405720 405 ntBASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 AC004890.1-201ENST00000461005 181 ntBASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 HMGN1P16-201ENST00000508308 283 ntBASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 TPM3P3-201ENST00000521343 354 ntBASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 MIR4271-201ENST00000582451 67 ntBASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 AL352984.2-202ENST00000613699 155 ntBASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 AL355834.1-201ENST00000556602 3965 ntBASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RSPO3Q9BXY4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 AL161756.3-201ENST00000641216 2071 ntBASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 AC022325.1-201ENST00000502748 2199 ntBASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 AC016583.1-201ENST00000624221 2431 ntBASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 SNORA64.3-201ENST00000365647 134 ntBASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 RNU6-316P-201ENST00000391027 107 ntBASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.63□□□□□ -1.51
RSPO3Q9BXY4 AL360013.1-201ENST00000419031 858 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms