Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AL135978.1-201ENST00000553618 1266 ntBASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AL591767.3-201ENST00000554632 525 ntBASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AL445383.1-201ENST00000554689 874 ntBASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC093278.2-201ENST00000564956 2485 ntBASIC6.63□□□□□ -1.35
HIPK4Q8NE63 EEF1B2P1-201ENST00000567221 672 ntBASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 RPSAP66-201ENST00000592196 606 ntBASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AL023806.2-201ENST00000603042 263 ntBASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AL049844.2-201ENST00000604280 628 ntBASIC6.63□□□□□ -1.35
HIPK4Q8NE63 Z94722.1-201ENST00000604328 474 ntBASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AL109936.2-201ENST00000605350 650 ntBASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AL451086.1-201ENST00000605596 223 ntBASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AL445647.2-201ENST00000615170 130 ntBASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC079416.3-201ENST00000624479 549 ntBASIC6.63□□□□□ -1.35
HIPK4Q8NE63 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.63□□□□□ -1.35
HIPK4Q8NE63 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 FOLH1B-202ENST00000529567 2145 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 CUBNP3-201ENST00000457461 1784 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 MKI67P1-201ENST00000604297 1460 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 OR2M1P-201ENST00000318104 951 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 MTCO3P4-201ENST00000419236 787 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 MED15P9-201ENST00000424716 533 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AC093422.3-201ENST00000428506 305 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AC009299.1-201ENST00000429684 717 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 RPL6P30-201ENST00000443382 862 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AC004022.1-201ENST00000447766 1066 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AL157884.3-201ENST00000448273 1184 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AC112492.1-201ENST00000449607 712 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 TCEAL4P1-201ENST00000453620 588 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 TPT1P3-201ENST00000492841 512 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 H3F3AP3-201ENST00000497682 407 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 OR4F28P-201ENST00000559128 938 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 RN7SL42P-201ENST00000579786 294 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 OR4F8P-201ENST00000589943 937 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AL022161.1-201ENST00000604390 213 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AC073387.2-201ENST00000604797 784 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AC026951.2-201ENST00000613847 241 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 AP000547.3-204ENST00000588548 2523 ntBASIC6.62□□□□□ -1.35
HIPK4Q8NE63 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
HIPK4Q8NE63 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms