Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 OTX2P1-201ENST00000450956 354 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC040975.1-201ENST00000472104 316 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 RN7SL751P-201ENST00000473281 284 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC109458.1-201ENST00000508858 316 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 IGLVVII-41-1-201ENST00000518405 151 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 ELOCP32-201ENST00000548625 324 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC090695.1-201ENST00000561269 1222 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC233699.1-201ENST00000569955 1168 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 RPL7AP69-201ENST00000595306 806 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC072046.2-201ENST00000618366 268 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC012254.5-201ENST00000623573 478 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC006210.2-201ENST00000367074 1545 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AL390195.2-201ENST00000564771 2023 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AC016930.1-201ENST00000468766 2205 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 RNA5SP382-201ENST00000363355 112 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 RAB11AP1-201ENST00000442978 646 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 RPS18P1-201ENST00000447840 458 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 RN7SL492P-201ENST00000460700 295 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 RN7SL568P-201ENST00000493069 298 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AC117522.1-201ENST00000509821 380 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AC079140.3-201ENST00000511111 550 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AC074344.1-201ENST00000512823 224 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 RNU6-1028P-201ENST00000517164 93 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AP000873.5-201ENST00000533906 236 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 MIR4271-201ENST00000582451 67 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 C8orf59P2-201ENST00000603441 271 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AC010678.1-201ENST00000614118 713 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 AL132796.3-201ENST00000624703 900 ntBASIC9.15□□□□□ -0.94
RC3H1Q5TC82 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
RC3H1Q5TC82 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
RC3H1Q5TC82 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC9.15□□□□□ -0.95
RC3H1Q5TC82 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC9.15□□□□□ -0.95
RC3H1Q5TC82 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
RC3H1Q5TC82 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.95
RC3H1Q5TC82 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC9.15□□□□□ -0.95
RC3H1Q5TC82 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
RC3H1Q5TC82 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 FGG-201ENST00000336098 1659 ntTSL 2 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
RC3H1Q5TC82 AC016716.1-201ENST00000265882 708 ntBASIC9.14□□□□□ -0.95
RC3H1Q5TC82 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms