Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL121917.2-201ENST00000605044 390 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 AC078938.1-201ENST00000620993 318 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 AC231657.1-201ENST00000624313 397 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 CASC19-212ENST00000641153 1287 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 AC113189.6-201ENST00000636696 3591 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 NUP58P1-201ENST00000502546 1738 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VARS2Q5ST30 OSBPL3-203ENST00000396431 2969 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VARS2Q5ST30 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 TCF7-202ENST00000378560 2929 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VARS2Q5ST30 AL136298.2-201ENST00000556497 1570 ntBASIC9.07□□□□□ -0.96
VARS2Q5ST30 ZNF583-202ENST00000333201 4916 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC9.07□□□□□ -0.96
VARS2Q5ST30 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 RBM18-201ENST00000417201 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC006299.1-203ENST00000499625 2029 ntTSL 5 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AHCYP5-201ENST00000331585 1238 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 Y_RNA.117-201ENST00000363294 101 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 RN7SKP239-201ENST00000364814 295 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 Y_RNA.557-201ENST00000384680 107 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AL451061.1-201ENST00000407887 862 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 RNU6-373P-201ENST00000411247 98 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 FABP5P1-201ENST00000423401 411 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 FDPSP1-201ENST00000424976 1071 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AL356583.2-201ENST00000426536 280 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 EEF1A1P27-201ENST00000429983 1135 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 FCF1P1-201ENST00000432690 571 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 UBE2FP3-201ENST00000436366 524 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 HMGB1P18-201ENST00000438801 619 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 MTCO3P45-201ENST00000443036 613 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC079594.1-201ENST00000489757 331 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC025674.1-201ENST00000507074 324 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 SUMO2P7-201ENST00000511179 285 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC009812.2-201ENST00000517657 457 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC109635.6-201ENST00000525487 1113 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 OR5F2P-201ENST00000532761 941 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC084033.3-201ENST00000551421 451 ntTSL 2 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 MIR4680-201ENST00000580906 66 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AL031281.2-201ENST00000606754 748 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC087821.2-201ENST00000637086 450 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC100810.6-201ENST00000638068 285 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 EEF1A1P13-201ENST00000503537 1389 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 MICB-204ENST00000538442 2411 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 IL2RA-202ENST00000379954 1562 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 CD86-209ENST00000493101 1572 ntTSL 2 BASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC092718.7-201ENST00000623577 1776 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 AC004491.1-201ENST00000623029 1882 ntBASIC9.06□□□□□ -0.96
VARS2Q5ST30 FOLH1B-201ENST00000525540 1974 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VARS2Q5ST30 MAP7D3-203ENST00000370661 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 CASC15-203ENST00000605917 4461 ntBASIC9.05□□□□□ -0.96
VARS2Q5ST30 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 ASCC1-202ENST00000317168 2002 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 GBP5-201ENST00000370459 2011 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
VARS2Q5ST30 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC9.05□□□□□ -0.96
VARS2Q5ST30 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms