Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC3.6□□□□□ -1.83
HSPG2P98160 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 RNA5SP319-201ENST00000362768 119 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 RNU4-4P-201ENST00000364588 130 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 COX6CP17-201ENST00000421389 185 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 OR7A15P-201ENST00000449848 1009 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.6□□□□□ -1.83
HSPG2P98160 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HSPG2P98160 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.6□□□□□ -1.83
HSPG2P98160 MIR3160-1-201ENST00000577972 85 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HSPG2P98160 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 DOPEY2-202ENST00000399151 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 ITIH6-201ENST00000218436 4968 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 CACNA1E-201ENST00000357570 7064 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 OR10R3P-201ENST00000361688 942 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 RNU11-6P-201ENST00000391127 133 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 AL133325.1-201ENST00000421090 382 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 AC073264.2-201ENST00000448886 166 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC3.6□□□□□ -1.83
HSPG2P98160 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC3.6□□□□□ -1.83
HSPG2P98160 AC011447.4-201ENST00000587562 111 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.6□□□□□ -1.83
HSPG2P98160 AC132068.1-201ENST00000623805 459 ntBASIC3.6□□□□□ -1.83
HSPG2P98160 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 PFKM-232ENST00000629846 381 ntTSL 4 BASIC3.6□□□□□ -1.83
HSPG2P98160 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC3.6□□□□□ -1.83
HSPG2P98160 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HSPG2P98160 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HSPG2P98160 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC3.6□□□□□ -1.83
HSPG2P98160 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC3.59□□□□□ -1.83
HSPG2P98160 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC3.59□□□□□ -1.83
HSPG2P98160 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC3.59□□□□□ -1.83
HSPG2P98160 SFTPD-AS1-201ENST00000608229 5001 ntBASIC3.59□□□□□ -1.83
HSPG2P98160 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
HSPG2P98160 HDAC1P2-201ENST00000453661 1398 ntBASIC3.59□□□□□ -1.83
HSPG2P98160 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 MIR1204-201ENST00000408388 67 ntBASIC3.59□□□□□ -1.83
HSPG2P98160 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC3.59□□□□□ -1.83
HSPG2P98160 MGAT2P2-201ENST00000427194 797 ntBASIC3.59□□□□□ -1.83
HSPG2P98160 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC3.59□□□□□ -1.83
HSPG2P98160 AC090638.1-201ENST00000498296 909 ntBASIC3.59□□□□□ -1.83
HSPG2P98160 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC3.59□□□□□ -1.83
HSPG2P98160 SCARNA6.1-201ENST00000516989 238 ntBASIC3.59□□□□□ -1.83
HSPG2P98160 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 CACNA1E-206ENST00000367573 7067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 AC119674.1-204ENST00000641348 1343 ntBASIC3.59□□□□□ -1.83
HSPG2P98160 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC3.59□□□□□ -1.83
HSPG2P98160 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
HSPG2P98160 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
HSPG2P98160 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 AL353625.1-202ENST00000366273 571 ntBASIC3.59□□□□□ -1.83
HSPG2P98160 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.59□□□□□ -1.83
HSPG2P98160 RPS27AP3-201ENST00000453803 454 ntBASIC3.59□□□□□ -1.83
HSPG2P98160 AC104164.1-201ENST00000460282 590 ntBASIC3.59□□□□□ -1.83
HSPG2P98160 RN7SL165P-201ENST00000477476 291 ntBASIC3.59□□□□□ -1.83
HSPG2P98160 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.59□□□□□ -1.83
HSPG2P98160 OR6M2P-201ENST00000529831 871 ntBASIC3.59□□□□□ -1.83
HSPG2P98160 AC087283.1-201ENST00000604029 1074 ntBASIC3.59□□□□□ -1.83
HSPG2P98160 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms