Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC009237.1-201ENST00000442127 744 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.67□□□□□ -1.34
HDAC4P56524 AC092601.1-201ENST00000444526 383 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 KF459542.1-201ENST00000450908 553 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 OR7L1P-201ENST00000456181 380 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.67□□□□□ -1.34
HDAC4P56524 RN7SL393P-201ENST00000463588 296 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HDAC4P56524 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.67□□□□□ -1.34
HDAC4P56524 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.67□□□□□ -1.34
HDAC4P56524 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.67□□□□□ -1.34
HDAC4P56524 RPL17P2-201ENST00000491913 451 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 SNRPCP11-201ENST00000492453 205 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 AC112184.1-201ENST00000505179 312 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 AC093815.1-201ENST00000508637 280 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.67□□□□□ -1.34
HDAC4P56524 COX6B1P4-201ENST00000519826 484 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.67□□□□□ -1.34
HDAC4P56524 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.67□□□□□ -1.34
HDAC4P56524 AP000619.2-201ENST00000546014 969 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.67□□□□□ -1.34
HDAC4P56524 AC037479.1-201ENST00000558361 625 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 RN7SL66P-201ENST00000582099 264 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.67□□□□□ -1.34
HDAC4P56524 AC009237.12-201ENST00000604755 742 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 AL008723.3-201ENST00000608926 449 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 AL445649.1-201ENST00000615941 691 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 TCL6_3.1-201ENST00000619064 137 ntBASIC6.67□□□□□ -1.34
HDAC4P56524 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.67□□□□□ -1.34
HDAC4P56524 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HDAC4P56524 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HDAC4P56524 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HDAC4P56524 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HDAC4P56524 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HDAC4P56524 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.66□□□□□ -1.34
HDAC4P56524 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 AC123769.1-201ENST00000530992 3192 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
HDAC4P56524 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
HDAC4P56524 RN7SKP129-201ENST00000410288 299 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 CASKP1-201ENST00000412870 582 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 FAM183DP-201ENST00000421987 399 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 GAPDHP19-201ENST00000431768 1005 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.66□□□□□ -1.34
HDAC4P56524 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.66□□□□□ -1.34
HDAC4P56524 GTF2IP14-201ENST00000441415 586 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 VN1R38P-201ENST00000450265 887 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.66□□□□□ -1.34
HDAC4P56524 NACAP5-201ENST00000509863 636 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.66□□□□□ -1.34
HDAC4P56524 RNA5SP418-201ENST00000515951 117 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.66□□□□□ -1.34
HDAC4P56524 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.66□□□□□ -1.34
HDAC4P56524 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
HDAC4P56524 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.66□□□□□ -1.34
HDAC4P56524 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.66□□□□□ -1.34
HDAC4P56524 AC023968.1-201ENST00000560719 475 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.66□□□□□ -1.34
HDAC4P56524 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.66□□□□□ -1.34
HDAC4P56524 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.66□□□□□ -1.34
HDAC4P56524 AC138207.8-204ENST00000579588 527 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.66□□□□□ -1.34
HDAC4P56524 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 AC018659.2-201ENST00000624690 715 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.66□□□□□ -1.34
HDAC4P56524 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.66□□□□□ -1.34
HDAC4P56524 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.66□□□□□ -1.34
HDAC4P56524 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
HDAC4P56524 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.66□□□□□ -1.34
HDAC4P56524 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC4P56524 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.66□□□□□ -1.34
HDAC4P56524 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.66□□□□□ -1.34
HDAC4P56524 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HDAC4P56524 SMG1P5-202ENST00000529428 4219 ntBASIC6.65□□□□□ -1.34
HDAC4P56524 SMG1P2-201ENST00000566127 4221 ntBASIC6.65□□□□□ -1.34
HDAC4P56524 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
HDAC4P56524 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HDAC4P56524 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HDAC4P56524 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HDAC4P56524 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
HDAC4P56524 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HDAC4P56524 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms