Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.73□□□□□ -1.49
SOX2P48431 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.73□□□□□ -1.49
SOX2P48431 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.73□□□□□ -1.49
SOX2P48431 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 AC073916.1-201ENST00000545095 130 ntBASIC5.73□□□□□ -1.49
SOX2P48431 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.73□□□□□ -1.49
SOX2P48431 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.73□□□□□ -1.49
SOX2P48431 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 AL096803.3-201ENST00000609032 532 ntBASIC5.73□□□□□ -1.49
SOX2P48431 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.73□□□□□ -1.49
SOX2P48431 AL645927.2-201ENST00000618350 349 ntBASIC5.73□□□□□ -1.49
SOX2P48431 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 AP003476.1-201ENST00000623984 516 ntBASIC5.73□□□□□ -1.49
SOX2P48431 AC106782.7-201ENST00000624024 418 ntBASIC5.73□□□□□ -1.49
SOX2P48431 AC018692.2-201ENST00000624130 348 ntBASIC5.73□□□□□ -1.49
SOX2P48431 AC133555.5-201ENST00000624430 418 ntBASIC5.73□□□□□ -1.49
SOX2P48431 AC004808.1-201ENST00000627671 721 ntBASIC5.73□□□□□ -1.49
SOX2P48431 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SOX2P48431 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SOX2P48431 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC5.73□□□□□ -1.49
SOX2P48431 ZNF402P-201ENST00000404435 3100 ntBASIC5.73□□□□□ -1.49
SOX2P48431 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.73□□□□□ -1.49
SOX2P48431 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.73□□□□□ -1.49
SOX2P48431 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SOX2P48431 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX2P48431 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.73□□□□□ -1.49
SOX2P48431 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SOX2P48431 AC073365.1-203ENST00000641055 1992 ntBASIC5.73□□□□□ -1.49
SOX2P48431 NEK2P2-201ENST00000438441 1338 ntBASIC5.73□□□□□ -1.49
SOX2P48431 HSPD1P8-201ENST00000400121 1658 ntBASIC5.72□□□□□ -1.49
SOX2P48431 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SOX2P48431 AC011369.2-201ENST00000624423 1567 ntBASIC5.72□□□□□ -1.49
SOX2P48431 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SOX2P48431 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SOX2P48431 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SOX2P48431 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX2P48431 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.72□□□□□ -1.49
SOX2P48431 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SOX2P48431 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX2P48431 RNU6-792P-201ENST00000363490 107 ntBASIC5.72□□□□□ -1.49
SOX2P48431 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SOX2P48431 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX2P48431 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SOX2P48431 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SOX2P48431 RNU4-64P-201ENST00000410795 131 ntBASIC5.72□□□□□ -1.49
SOX2P48431 RN7SKP137-201ENST00000411074 307 ntBASIC5.72□□□□□ -1.49
SOX2P48431 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.72□□□□□ -1.49
SOX2P48431 RAB9AP4-201ENST00000415230 609 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.72□□□□□ -1.49
SOX2P48431 RPS26P4-201ENST00000431743 355 ntBASIC5.72□□□□□ -1.49
SOX2P48431 RAB9AP5-201ENST00000437794 597 ntBASIC5.72□□□□□ -1.49
SOX2P48431 Z99127.2-201ENST00000441426 334 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AC009237.1-201ENST00000442127 744 ntBASIC5.72□□□□□ -1.49
SOX2P48431 RAB9AP2-201ENST00000443911 597 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AC098826.2-201ENST00000452011 651 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.72□□□□□ -1.49
SOX2P48431 SRP68P2-201ENST00000456184 254 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.72□□□□□ -1.49
SOX2P48431 AL022319.1-201ENST00000458183 1167 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.72□□□□□ -1.49
SOX2P48431 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.72□□□□□ -1.49
SOX2P48431 AC022336.1-201ENST00000475510 337 ntBASIC5.72□□□□□ -1.49
SOX2P48431 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX2P48431 AC015864.1-201ENST00000496512 544 ntBASIC5.72□□□□□ -1.49
SOX2P48431 MTND6P8-201ENST00000503471 522 ntBASIC5.72□□□□□ -1.49
SOX2P48431 MRPL49P1-201ENST00000505951 535 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.72□□□□□ -1.49
SOX2P48431 IGKV2D-38-201ENST00000518423 240 ntBASIC5.72□□□□□ -1.49
SOX2P48431 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
SOX2P48431 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.72□□□□□ -1.49
SOX2P48431 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC5.72□□□□□ -1.49
SOX2P48431 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX2P48431 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.72□□□□□ -1.49
SOX2P48431 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SOX2P48431 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.72□□□□□ -1.49
SOX2P48431 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.72□□□□□ -1.49
SOX2P48431 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.72□□□□□ -1.49
SOX2P48431 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.72□□□□□ -1.49
SOX2P48431 AL132640.1-201ENST00000559594 619 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AL132640.2-202ENST00000559732 614 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX2P48431 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SOX2P48431 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX2P48431 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX2P48431 AC011193.2-201ENST00000582638 367 ntBASIC5.72□□□□□ -1.49
SOX2P48431 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.72□□□□□ -1.49
SOX2P48431 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.72□□□□□ -1.49
SOX2P48431 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.72□□□□□ -1.49
SOX2P48431 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.72□□□□□ -1.49
SOX2P48431 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.72□□□□□ -1.49
SOX2P48431 AC068620.3-201ENST00000602749 560 ntBASIC5.72□□□□□ -1.49
SOX2P48431 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC5.72□□□□□ -1.49
SOX2P48431 AL445528.2-201ENST00000620582 470 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AP001264.1-201ENST00000620602 703 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms