Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AL355032.1-201ENST00000472981 438 ntBASIC6.57□□□□□ -1.36
MMP13P45452 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP13P45452 SNRPCP11-201ENST00000492453 205 ntBASIC6.57□□□□□ -1.36
MMP13P45452 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP13P45452 AC018645.1-201ENST00000505003 109 ntBASIC6.57□□□□□ -1.36
MMP13P45452 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP13P45452 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP13P45452 RNU6-467P-201ENST00000517027 110 ntBASIC6.57□□□□□ -1.36
MMP13P45452 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.57□□□□□ -1.36
MMP13P45452 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP13P45452 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.57□□□□□ -1.36
MMP13P45452 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP13P45452 NATP-201ENST00000523491 878 ntBASIC6.57□□□□□ -1.36
MMP13P45452 AL133399.1-201ENST00000527476 298 ntBASIC6.57□□□□□ -1.36
MMP13P45452 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP13P45452 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP13P45452 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.57□□□□□ -1.36
MMP13P45452 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP13P45452 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.57□□□□□ -1.36
MMP13P45452 AC092474.3-201ENST00000603022 568 ntBASIC6.57□□□□□ -1.36
MMP13P45452 AC011458.1-201ENST00000604034 617 ntBASIC6.57□□□□□ -1.36
MMP13P45452 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP13P45452 AC003001.2-201ENST00000616294 831 ntBASIC6.57□□□□□ -1.36
MMP13P45452 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
MMP13P45452 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP13P45452 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.57□□□□□ -1.36
MMP13P45452 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP13P45452 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP13P45452 AC092646.2-201ENST00000431242 2095 ntBASIC6.57□□□□□ -1.36
MMP13P45452 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
MMP13P45452 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP13P45452 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP13P45452 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP13P45452 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
MMP13P45452 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP13P45452 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP13P45452 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP13P45452 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
MMP13P45452 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.56□□□□□ -1.36
MMP13P45452 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.56□□□□□ -1.36
MMP13P45452 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.56□□□□□ -1.36
MMP13P45452 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP13P45452 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MMP13P45452 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP13P45452 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP13P45452 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MMP13P45452 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
MMP13P45452 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.56□□□□□ -1.36
MMP13P45452 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
MMP13P45452 RN7SKP281-201ENST00000410472 352 ntBASIC6.56□□□□□ -1.36
MMP13P45452 MED28P4-201ENST00000433137 572 ntBASIC6.56□□□□□ -1.36
MMP13P45452 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MMP13P45452 AC092601.1-201ENST00000444526 383 ntBASIC6.56□□□□□ -1.36
MMP13P45452 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.56□□□□□ -1.36
MMP13P45452 AL022319.1-201ENST00000458183 1167 ntBASIC6.56□□□□□ -1.36
MMP13P45452 MTND3P6-201ENST00000485242 339 ntBASIC6.56□□□□□ -1.36
MMP13P45452 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.56□□□□□ -1.36
MMP13P45452 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.56□□□□□ -1.36
MMP13P45452 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.56□□□□□ -1.36
MMP13P45452 AC111000.5-201ENST00000506559 1178 ntBASIC6.56□□□□□ -1.36
MMP13P45452 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.56□□□□□ -1.36
MMP13P45452 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.56□□□□□ -1.36
MMP13P45452 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.56□□□□□ -1.36
MMP13P45452 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.56□□□□□ -1.36
MMP13P45452 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.56□□□□□ -1.36
MMP13P45452 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.56□□□□□ -1.36
MMP13P45452 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.56□□□□□ -1.36
MMP13P45452 AC023968.1-201ENST00000560719 475 ntBASIC6.56□□□□□ -1.36
MMP13P45452 AC025283.1-201ENST00000572039 734 ntBASIC6.56□□□□□ -1.36
MMP13P45452 MIR3157-201ENST00000578688 85 ntBASIC6.56□□□□□ -1.36
MMP13P45452 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.56□□□□□ -1.36
MMP13P45452 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.56□□□□□ -1.36
MMP13P45452 GAPDHP41-201ENST00000613707 975 ntBASIC6.56□□□□□ -1.36
MMP13P45452 AL359742.1-201ENST00000622497 540 ntBASIC6.56□□□□□ -1.36
MMP13P45452 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
MMP13P45452 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.56□□□□□ -1.36
MMP13P45452 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP13P45452 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP13P45452 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
MMP13P45452 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
MMP13P45452 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP13P45452 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP13P45452 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
MMP13P45452 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.56□□□□□ -1.36
MMP13P45452 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP13P45452 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP13P45452 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP13P45452 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MMP13P45452 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
MMP13P45452 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP13P45452 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
MMP13P45452 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
MMP13P45452 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP13P45452 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.55□□□□□ -1.36
MMP13P45452 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.55□□□□□ -1.36
MMP13P45452 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MMP13P45452 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
MMP13P45452 OR5T3-201ENST00000303059 1023 ntBASIC6.55□□□□□ -1.36
MMP13P45452 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
MMP13P45452 SNORD35A-201ENST00000363389 86 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms