Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.48□□□□□ -1.37
RETP07949 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.48□□□□□ -1.37
RETP07949 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.48□□□□□ -1.37
RETP07949 ATP5LP2-201ENST00000440646 311 ntBASIC6.48□□□□□ -1.37
RETP07949 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.48□□□□□ -1.37
RETP07949 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.48□□□□□ -1.37
RETP07949 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.48□□□□□ -1.37
RETP07949 SCARNA5-201ENST00000516201 276 ntBASIC6.48□□□□□ -1.37
RETP07949 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.48□□□□□ -1.37
RETP07949 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.48□□□□□ -1.37
RETP07949 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.48□□□□□ -1.37
RETP07949 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.48□□□□□ -1.37
RETP07949 AC007225.2-201ENST00000562529 256 ntBASIC6.48□□□□□ -1.37
RETP07949 AC016180.1-201ENST00000567945 403 ntBASIC6.48□□□□□ -1.37
RETP07949 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.48□□□□□ -1.37
RETP07949 RN7SL404P-201ENST00000582421 281 ntBASIC6.48□□□□□ -1.37
RETP07949 FAM72A-208ENST00000607379 1139 ntBASIC6.48□□□□□ -1.37
RETP07949 AC092681.3-201ENST00000609463 678 ntBASIC6.48□□□□□ -1.37
RETP07949 AL080312.2-201ENST00000613001 630 ntBASIC6.48□□□□□ -1.37
RETP07949 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.48□□□□□ -1.37
RETP07949 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.48□□□□□ -1.37
RETP07949 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RETP07949 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
RETP07949 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RETP07949 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RETP07949 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RETP07949 AC123769.1-201ENST00000530992 3192 ntBASIC6.48□□□□□ -1.37
RETP07949 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RETP07949 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RETP07949 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RETP07949 AC091305.2-201ENST00000624049 1576 ntBASIC6.48□□□□□ -1.37
RETP07949 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.48□□□□□ -1.37
RETP07949 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RETP07949 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RETP07949 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.48□□□□□ -1.37
RETP07949 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RETP07949 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.47□□□□□ -1.37
RETP07949 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RETP07949 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.47□□□□□ -1.37
RETP07949 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
RETP07949 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.47□□□□□ -1.37
RETP07949 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.47□□□□□ -1.37
RETP07949 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RETP07949 AC022034.1-201ENST00000512867 2156 ntBASIC6.47□□□□□ -1.37
RETP07949 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.47□□□□□ -1.37
RETP07949 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RETP07949 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
RETP07949 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RETP07949 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RETP07949 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RETP07949 RNU4-64P-201ENST00000410795 131 ntBASIC6.47□□□□□ -1.37
RETP07949 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.47□□□□□ -1.37
RETP07949 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.47□□□□□ -1.37
RETP07949 BX510359.3-201ENST00000422168 306 ntBASIC6.47□□□□□ -1.37
RETP07949 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.47□□□□□ -1.37
RETP07949 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RETP07949 AL451136.1-201ENST00000435399 325 ntBASIC6.47□□□□□ -1.37
RETP07949 AL590399.4-201ENST00000436561 601 ntBASIC6.47□□□□□ -1.37
RETP07949 CRYGGP-201ENST00000443337 145 ntBASIC6.47□□□□□ -1.37
RETP07949 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.47□□□□□ -1.37
RETP07949 VPS25P1-201ENST00000455691 508 ntBASIC6.47□□□□□ -1.37
RETP07949 AC098847.1-201ENST00000473094 348 ntBASIC6.47□□□□□ -1.37
RETP07949 RN7SL561P-201ENST00000488553 281 ntBASIC6.47□□□□□ -1.37
RETP07949 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.47□□□□□ -1.37
RETP07949 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.47□□□□□ -1.37
RETP07949 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.47□□□□□ -1.37
RETP07949 AC008429.2-201ENST00000523057 864 ntBASIC6.47□□□□□ -1.37
RETP07949 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.47□□□□□ -1.37
RETP07949 RN7SL208P-201ENST00000577964 296 ntBASIC6.47□□□□□ -1.37
RETP07949 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.47□□□□□ -1.37
RETP07949 AC073488.9-201ENST00000631601 754 ntBASIC6.47□□□□□ -1.37
RETP07949 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.47□□□□□ -1.37
RETP07949 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.47□□□□□ -1.37
RETP07949 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RETP07949 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RETP07949 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RETP07949 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RETP07949 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RETP07949 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RETP07949 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.47□□□□□ -1.37
RETP07949 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.47□□□□□ -1.37
RETP07949 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RETP07949 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RETP07949 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RETP07949 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RETP07949 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.47□□□□□ -1.37
RETP07949 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
RETP07949 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.46□□□□□ -1.37
RETP07949 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RETP07949 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.37
RETP07949 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RETP07949 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RETP07949 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
RETP07949 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
RETP07949 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RETP07949 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RETP07949 RNA5SP65-201ENST00000363166 119 ntBASIC6.46□□□□□ -1.38
RETP07949 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms