Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.25□□□□□ -1.41
RIPK2O43353 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
RIPK2O43353 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RIPK2O43353 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.25□□□□□ -1.41
RIPK2O43353 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RIPK2O43353 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RIPK2O43353 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RIPK2O43353 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RIPK2O43353 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK2O43353 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
RIPK2O43353 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK2O43353 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK2O43353 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.24□□□□□ -1.41
RIPK2O43353 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK2O43353 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK2O43353 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK2O43353 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RIPK2O43353 U3.10-201ENST00000364459 214 ntBASIC6.24□□□□□ -1.41
RIPK2O43353 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RIPK2O43353 AC019178.1-201ENST00000392337 440 ntBASIC6.24□□□□□ -1.41
RIPK2O43353 AL354868.1-201ENST00000417077 482 ntBASIC6.24□□□□□ -1.41
RIPK2O43353 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.24□□□□□ -1.41
RIPK2O43353 AL845321.1-201ENST00000444603 348 ntBASIC6.24□□□□□ -1.41
RIPK2O43353 AC022080.2-201ENST00000452932 533 ntBASIC6.24□□□□□ -1.41
RIPK2O43353 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.24□□□□□ -1.41
RIPK2O43353 RN7SL643P-201ENST00000471845 291 ntBASIC6.24□□□□□ -1.41
RIPK2O43353 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.24□□□□□ -1.41
RIPK2O43353 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.24□□□□□ -1.41
RIPK2O43353 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.24□□□□□ -1.41
RIPK2O43353 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.24□□□□□ -1.41
RIPK2O43353 RPL3P13-201ENST00000550415 216 ntBASIC6.24□□□□□ -1.41
RIPK2O43353 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.24□□□□□ -1.41
RIPK2O43353 MIR4258-201ENST00000580920 91 ntBASIC6.24□□□□□ -1.41
RIPK2O43353 MIR3187-201ENST00000583431 70 ntBASIC6.24□□□□□ -1.41
RIPK2O43353 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.24□□□□□ -1.41
RIPK2O43353 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.24□□□□□ -1.41
RIPK2O43353 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK2O43353 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK2O43353 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
RIPK2O43353 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
RIPK2O43353 AC079248.1-201ENST00000427568 1546 ntBASIC6.24□□□□□ -1.41
RIPK2O43353 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RIPK2O43353 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK2O43353 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK2O43353 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.24□□□□□ -1.41
RIPK2O43353 AC016583.1-201ENST00000624221 2431 ntBASIC6.24□□□□□ -1.41
RIPK2O43353 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK2O43353 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RIPK2O43353 AL355488.2-201ENST00000609909 2850 ntBASIC6.24□□□□□ -1.41
RIPK2O43353 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RIPK2O43353 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
RIPK2O43353 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.23□□□□□ -1.41
RIPK2O43353 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RIPK2O43353 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RIPK2O43353 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RIPK2O43353 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RIPK2O43353 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RIPK2O43353 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RIPK2O43353 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RIPK2O43353 MTHFD2P5-201ENST00000320415 844 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
RIPK2O43353 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
RIPK2O43353 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.23□□□□□ -1.41
RIPK2O43353 CDC42P6-201ENST00000421246 576 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 AL589794.1-201ENST00000424971 390 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.23□□□□□ -1.41
RIPK2O43353 VN1R53P-201ENST00000429536 957 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 GTF2IP14-201ENST00000441415 586 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.23□□□□□ -1.41
RIPK2O43353 RPL23AP60-201ENST00000450011 454 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC6.23□□□□□ -1.41
RIPK2O43353 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.23□□□□□ -1.41
RIPK2O43353 RN7SKP198-201ENST00000459286 306 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
RIPK2O43353 RN7SL369P-201ENST00000477138 299 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.23□□□□□ -1.41
RIPK2O43353 AC124945.1-201ENST00000485133 188 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RIPK2O43353 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RIPK2O43353 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.23□□□□□ -1.41
RIPK2O43353 AC096661.1-201ENST00000515870 822 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.23□□□□□ -1.41
RIPK2O43353 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.23□□□□□ -1.41
RIPK2O43353 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.23□□□□□ -1.41
RIPK2O43353 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.23□□□□□ -1.41
RIPK2O43353 RBMS2P1-201ENST00000525031 1226 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 AP001858.2-201ENST00000536213 601 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.23□□□□□ -1.41
RIPK2O43353 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.23□□□□□ -1.41
RIPK2O43353 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.23□□□□□ -1.41
RIPK2O43353 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.23□□□□□ -1.41
RIPK2O43353 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.23□□□□□ -1.41
RIPK2O43353 RN7SL131P-201ENST00000579043 256 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 SYPL1P2-201ENST00000582878 727 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 AL591167.1-201ENST00000607321 456 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 AL136097.3-201ENST00000611097 505 ntBASIC6.23□□□□□ -1.41
RIPK2O43353 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.23□□□□□ -1.41
RIPK2O43353 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RIPK2O43353 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RIPK2O43353 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms