Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC138409.2-202ENST00000507274 458 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 AC019227.1-201ENST00000526902 510 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 AC005363.1-201ENST00000530779 351 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.62□□□□□ -1.35
TRIM38O00635 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM38O00635 AC093524.1-201ENST00000564266 1094 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 AL132657.2-201ENST00000564417 358 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM38O00635 AC011497.2-201ENST00000600255 639 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 AC091768.1-201ENST00000609258 930 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 SNORA16A-202ENST00000628458 135 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 AC111152.1-202ENST00000635848 339 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
TRIM38O00635 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM38O00635 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
TRIM38O00635 MAPK10-357ENST00000641831 2858 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
TRIM38O00635 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 AL022323.4-201ENST00000623980 13120 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 ZNF658B-201ENST00000602828 3408 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM38O00635 AC093278.2-201ENST00000564956 2485 ntBASIC6.61□□□□□ -1.35
TRIM38O00635 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM38O00635 AC112255.1-201ENST00000624070 2493 ntBASIC6.61□□□□□ -1.35
TRIM38O00635 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM38O00635 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM38O00635 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM38O00635 Z83820.1-201ENST00000456978 1499 ntBASIC6.61□□□□□ -1.35
TRIM38O00635 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM38O00635 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM38O00635 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM38O00635 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM38O00635 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM38O00635 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM38O00635 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM38O00635 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.61□□□□□ -1.35
TRIM38O00635 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM38O00635 AL356806.1-201ENST00000422524 916 ntBASIC6.61□□□□□ -1.35
TRIM38O00635 GAPDHP57-201ENST00000424400 585 ntBASIC6.61□□□□□ -1.35
TRIM38O00635 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM38O00635 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM38O00635 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM38O00635 RPL12P11-201ENST00000439970 501 ntBASIC6.61□□□□□ -1.35
TRIM38O00635 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM38O00635 AC117395.1-201ENST00000487390 403 ntBASIC6.61□□□□□ -1.35
TRIM38O00635 RPL17P2-201ENST00000491913 451 ntBASIC6.61□□□□□ -1.35
TRIM38O00635 RPS27P20-201ENST00000492051 246 ntBASIC6.61□□□□□ -1.35
TRIM38O00635 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM38O00635 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TRIM38O00635 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM38O00635 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM38O00635 RN7SL230P-201ENST00000580835 303 ntBASIC6.61□□□□□ -1.35
TRIM38O00635 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM38O00635 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM38O00635 AC091193.1-201ENST00000604640 448 ntBASIC6.61□□□□□ -1.35
TRIM38O00635 AC005972.3-201ENST00000606304 481 ntBASIC6.61□□□□□ -1.35
TRIM38O00635 MIR6778-201ENST00000617912 73 ntBASIC6.61□□□□□ -1.35
TRIM38O00635 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM38O00635 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM38O00635 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TRIM38O00635 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
TRIM38O00635 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM38O00635 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM38O00635 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM38O00635 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM38O00635 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
TRIM38O00635 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM38O00635 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM38O00635 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM38O00635 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM38O00635 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM38O00635 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
TRIM38O00635 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TRIM38O00635 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TRIM38O00635 AL731556.1-201ENST00000394628 3711 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM38O00635 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM38O00635 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
TRIM38O00635 RNA5SP321-201ENST00000362722 111 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.6□□□□□ -1.35
TRIM38O00635 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.6□□□□□ -1.35
TRIM38O00635 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
TRIM38O00635 AL391419.1-201ENST00000398901 1275 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 MIR1282-201ENST00000408865 101 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 AC096537.2-201ENST00000413707 714 ntBASIC6.6□□□□□ -1.35
TRIM38O00635 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM38O00635 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM38O00635 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
TRIM38O00635 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms