Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 MAPK10-290ENST00000641237 2826 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 NACA-216ENST00000550952 2922 ntTSL 2 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 DDX43P1-201ENST00000510713 1763 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC026310.1-201ENST00000396004 378 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 RNA5SP280-201ENST00000411230 115 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC006960.1-201ENST00000419980 153 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC004074.1-201ENST00000421810 1063 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AL139184.1-202ENST00000422303 222 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 MOB1AP1-201ENST00000430903 535 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 FTLP17-201ENST00000432567 525 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AL596276.1-201ENST00000434465 418 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AL121601.2-201ENST00000438019 707 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC009237.4-201ENST00000441078 238 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 SS18L2P1-201ENST00000445923 213 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 UBE2V1P7-201ENST00000446395 340 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AL109741.2-201ENST00000455561 343 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC096743.1-201ENST00000485172 319 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 RN7SL306P-201ENST00000492941 296 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 DSTNP2-201ENST00000504533 515 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AK4P6-201ENST00000505168 528 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 FGB-207ENST00000509493 1164 ntTSL 5 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 RNU6-319P-201ENST00000516025 108 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 RNA5SP303-201ENST00000516192 130 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 Vault.2-201ENST00000516519 98 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC005363.1-201ENST00000530779 351 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AL606834.2-201ENST00000602954 668 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC069499.2-201ENST00000610665 382 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AL683826.1-201ENST00000624104 627 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 EPS15P1-202ENST00000459691 2071 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 AC006042.3-201ENST00000454684 1469 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 OR2A20P-201ENST00000479887 2913 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 CCAT2-201ENST00000630920 1752 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 FAM3C2-201ENST00000312214 681 ntBASIC8.97□□□□□ -0.97
ZC3H4Q9UPT8 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms