Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AC090236.2-201ENST00000587933 1101 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AC108673.3-201ENST00000609183 335 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AL590410.1-201ENST00000617925 333 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AC103798.2-201ENST00000624292 632 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 HPVC1-201ENST00000629899 1198 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AL139384.2-201ENST00000613809 3590 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 AC008627.1-201ENST00000517511 1704 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 NEK2P2-201ENST00000438441 1338 ntBASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RTFDC1Q9BY42 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 RNA5SP178-201ENST00000410380 128 ntBASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 BMS1P13-201ENST00000417301 885 ntBASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 BMS1P10-201ENST00000443754 1120 ntBASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AC026688.1-201ENST00000520639 1168 ntBASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AP003396.4-201ENST00000527574 265 ntBASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 DPPA3P2-201ENST00000553589 478 ntBASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 MIR4443-201ENST00000585052 53 ntBASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AC008555.7-201ENST00000605008 583 ntBASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 MRPL57P1-201ENST00000621486 265 ntBASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AC073488.3-201ENST00000631611 778 ntBASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 AC062022.1-201ENST00000451026 1684 ntBASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
RTFDC1Q9BY42 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 TMSB4XP4-201ENST00000323496 618 ntBASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 RNFT1P3-201ENST00000340898 1052 ntBASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 RNU6-883P-201ENST00000384597 107 ntBASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 RNU6-564P-201ENST00000410983 104 ntBASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 RPL12P43-201ENST00000420608 499 ntBASIC7.72□□□□□ -1.17
RTFDC1Q9BY42 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms