Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC008173.1-201ENST00000418901 264 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC073324.1-201ENST00000425993 1435 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 POU5F1P5-201ENST00000445059 658 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 HMGB1P48-201ENST00000446155 598 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC007327.1-201ENST00000447461 264 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC097359.1-201ENST00000447946 463 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 MEF2AP1-201ENST00000454867 863 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 RPS14P7-201ENST00000473701 448 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC021678.1-201ENST00000505195 936 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 MTCYBP43-201ENST00000513621 740 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 SCARNA6-201ENST00000515982 265 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 RNU6-678P-201ENST00000516832 109 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC090022.1-201ENST00000546569 311 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AL355836.1-201ENST00000555951 870 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC090971.3-201ENST00000557871 1041 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC106734.1-201ENST00000568646 663 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 MIR4795-201ENST00000584182 89 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 ZNF252P-208ENST00000592792 2485 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC092032.1-201ENST00000603090 165 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC015871.2-201ENST00000603605 948 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC116312.1-201ENST00000606841 314 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AP005329.3-201ENST00000609924 686 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 RNVU1-19-201ENST00000613023 167 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC023158.2-201ENST00000614876 543 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AP003122.6-201ENST00000623831 495 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC135068.5-201ENST00000624197 983 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AP000577.1-201ENST00000624366 878 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AC010653.3-201ENST00000635332 232 ntBASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 STRIP1-202ENST00000369796 3125 ntTSL 2 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 AP3B2-209ENST00000542200 3921 ntTSL 2 BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 MRPS11-201ENST00000325844 3644 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL25A1Q9BXS0 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 NF1P8-201ENST00000415351 1461 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 TCF4-254ENST00000626584 1701 ntTSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 RARB-201ENST00000330688 3084 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 CD44-206ENST00000415148 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC093225.1-201ENST00000506867 1408 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 UVRAG-208ENST00000532130 1831 ntTSL 2 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 DHFR2-206ENST00000619045 1802 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 NAP1L4P1-201ENST00000319092 1157 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 RN7SKP226-201ENST00000364912 300 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 Y_RNA.465-201ENST00000384293 102 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 SNORA68-201ENST00000384437 133 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 FAUP2-201ENST00000394301 401 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 HMGN1P34-201ENST00000413023 290 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC079355.1-201ENST00000421770 223 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 MTAPP2-201ENST00000437063 832 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 RHEBP1-201ENST00000448647 556 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 RNA5SP269-201ENST00000459032 137 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 RN7SL233P-201ENST00000469988 277 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 RPS3AP17-201ENST00000472594 777 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 RN7SL392P-201ENST00000473024 299 ntBASIC7.81□□□□□ -1.16
COL25A1Q9BXS0 AC100843.1-201ENST00000475372 550 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms