Protein–RNA interactions for Protein: Q96MF4

CCDC140, Coiled-coil domain-containing protein 140, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140Q96MF4 RPL34P29-201ENST00000491411 325 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC011352.3-201ENST00000505162 593 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC122718.2-201ENST00000505325 591 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 NTAN1P2-201ENST00000515730 940 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 OR5AK1P-201ENST00000524837 922 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC087280.1-201ENST00000530632 1003 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 PDCL3P1-201ENST00000534575 734 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 OR4N1P-201ENST00000554847 949 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 EIF4A3P1-201ENST00000578499 647 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC107982.3-201ENST00000584957 985 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC008507.1-201ENST00000587506 734 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AL078623.1-201ENST00000602702 907 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC067773.1-201ENST00000603284 1094 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AL390816.3-201ENST00000604527 1066 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC112220.3-201ENST00000605502 502 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AL356052.1-201ENST00000605764 376 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC092354.1-201ENST00000606057 376 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC243772.3-202ENST00000609662 1148 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 RN7SL3-201ENST00000610674 299 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC005962.2-201ENST00000611427 652 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC023509.5-201ENST00000617434 807 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 SLC20A1P2-201ENST00000618036 966 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC012557.3-201ENST00000626439 255 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 SAMMSON-209ENST00000641222 1100 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 THAP12P1-201ENST00000398672 2203 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 IMMTP1-201ENST00000435590 2219 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC026464.2-201ENST00000567834 2421 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 IL24-207ENST00000611909 1621 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC140Q96MF4 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.06□□□□□ -1.44
CCDC140Q96MF4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 LINC02035-201ENST00000610128 5476 ntBASIC6.06□□□□□ -1.44
CCDC140Q96MF4 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 DLD-205ENST00000440410 1993 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.06□□□□□ -1.44
CCDC140Q96MF4 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 PPCS-204ENST00000372562 966 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 U3.28-201ENST00000391249 210 ntBASIC6.06□□□□□ -1.44
CCDC140Q96MF4 RPL5P35-201ENST00000398869 816 ntBASIC6.06□□□□□ -1.44
CCDC140Q96MF4 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 RPS26P38-201ENST00000414476 348 ntBASIC6.06□□□□□ -1.44
CCDC140Q96MF4 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC6.06□□□□□ -1.44
CCDC140Q96MF4 AC092646.1-201ENST00000427142 901 ntBASIC6.06□□□□□ -1.44
CCDC140Q96MF4 AC002069.1-201ENST00000429649 1159 ntBASIC6.06□□□□□ -1.44
CCDC140Q96MF4 PCBP2P1-201ENST00000437262 977 ntBASIC6.06□□□□□ -1.44
CCDC140Q96MF4 TXNP5-201ENST00000441043 315 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms